RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CEP126Q9P2H0 1117 aa14.99□□□□□ -0.01
YBX3-207ENST00000539204 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 GPR75-ASB3A0A0A6YYF3 556 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 MAP3K12Q12852 859 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
YBX3-207ENST00000539204 GRIN2CQ14957 1233 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
YBX3-207ENST00000539204 GJC2Q5T442 439 aaPredicted RBP14.98□□□□□ -0.01
YBX3-207ENST00000539204 WDR63Q8IWG1 891 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 USP38Q8NB14 1042 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 PAGR1Q9BTK6 254 aa14.98□□□□□ -0.01
YBX3-207ENST00000539204 USP17L10C9JJH3 530 aa14.97□□□□□ -0.01
YBX3-207ENST00000539204 PHKA1P46020 1223 aa14.97□□□□□ -0.01
YBX3-207ENST00000539204 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
YBX3-207ENST00000539204 FLRT1Q9NZU1 646 aa14.97□□□□□ -0.01
YBX3-207ENST00000539204 HERC5Q9UII4 1024 aaKnown RBP14.97□□□□□ -0.01
YBX3-207ENST00000539204 MROH7-TTC4A0A0A0MT08 1334 aa14.96□□□□□ -0.01
YBX3-207ENST00000539204 MAP4K4O95819 1239 aaPredicted RBP14.96□□□□□ -0.01
YBX3-207ENST00000539204 ASNSP08243 561 aa14.96□□□□□ -0.01
YBX3-207ENST00000539204 RFX5P48382 616 aaPredicted RBP14.96□□□□□ -0.01
YBX3-207ENST00000539204 RHBDL3P58872 404 aa14.96□□□□□ -0.01
YBX3-207ENST00000539204 CCNA1P78396 465 aa14.96□□□□□ -0.01
YBX3-207ENST00000539204 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.01
YBX3-207ENST00000539204 MYH2Q9UKX2 1941 aa14.96□□□□□ -0.02
YBX3-207ENST00000539204 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.95□□□□□ -0.02
YBX3-207ENST00000539204 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.95□□□□□ -0.02
YBX3-207ENST00000539204 TRIM43BA6NCK2 446 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 SLC15A5A6NIM6 579 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 KBTBD13C9JR72 458 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 ZBTB22O15209 634 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
YBX3-207ENST00000539204 WDR78Q5VTH9 848 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 CCDC102BQ68D86 513 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 PPM1EQ8WY54 764 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 TRIM43Q96BQ3 446 aaPredicted RBP14.95□□□□□ -0.02
YBX3-207ENST00000539204 ASB2Q96Q27 587 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 NDUFB9Q9Y6M9 179 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 MYH13Q9UKX3 1938 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 LOC285556D6RIA3 1793 aa14.95□□□□□ -0.02
YBX3-207ENST00000539204 LDHCP07864 332 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 CYP2C19P33261 490 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 MECOMQ03112 1051 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 SH3RF1Q7Z6J0 888 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 ADAMTS19Q8TE59 1207 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 USP44Q9H0E7 712 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 SIL1Q9H173 461 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 ZNF576Q9H609 170 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 PDLIM7Q9NR12 457 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 PI4KBQ9UBF8 816 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 RABGAP1Q9Y3P9 1069 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 SALL2Q9Y467 1007 aaPredicted RBP14.94□□□□□ -0.02
YBX3-207ENST00000539204 TACC3Q9Y6A5 838 aa14.94□□□□□ -0.02
YBX3-207ENST00000539204 CIAO1O76071 339 aa14.93□□□□□ -0.02
YBX3-207ENST00000539204 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
YBX3-207ENST00000539204 PTPREP23469 700 aa14.93□□□□□ -0.02
YBX3-207ENST00000539204 MRPS5P82675 430 aaKnown RBP14.93□□□□□ -0.02
YBX3-207ENST00000539204 SNX17Q15036 470 aa14.93□□□□□ -0.02
YBX3-207ENST00000539204 UHRF1Q96T88 793 aaPredicted RBP14.93□□□□□ -0.02
YBX3-207ENST00000539204 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
YBX3-207ENST00000539204 IVNS1ABPQ9Y6Y0 642 aa14.93□□□□□ -0.02
YBX3-207ENST00000539204 NCOR1O75376 2440 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 HOXC6P09630 235 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 DNAJB2P25686 324 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 GSTO1P78417 241 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 RASGRF1Q13972 1273 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 C1orf53Q5VUE5 145 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 POTEEQ6S8J3 1075 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 IL27Q8NEV9 243 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 C1QTNF1Q9BXJ1 281 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 DHX36Q9H2U1 1008 aaKnown RBP14.92□□□□□ -0.02
YBX3-207ENST00000539204 EMILIN3Q9NT22 766 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 GINM1Q9NU53 330 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 MAST2Q6P0Q8 1798 aa14.92□□□□□ -0.02
YBX3-207ENST00000539204 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
YBX3-207ENST00000539204 ADORA1P30542 326 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 IL15P40933 162 aaPredicted RBP14.91□□□□□ -0.02
YBX3-207ENST00000539204 TLE2Q04725 743 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 USP17L2Q6R6M4 530 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 FOXP4Q8IVH2 680 aaPredicted RBP14.91□□□□□ -0.02
YBX3-207ENST00000539204 NPLOC4Q8TAT6 608 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 FERMT2Q96AC1 680 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 TRIM34Q9BYJ4 488 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 LTBP2Q14767 1821 aa14.91□□□□□ -0.02
YBX3-207ENST00000539204 BDP1A6H8Y1 2624 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L15C9J2P7 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L13C9JLJ4 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L11C9JVI0 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L18D6R9N7 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L22D6RA61 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L17D6RBQ6 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L19D6RCP7 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 USP17L20D6RJB6 530 aa14.9□□□□□ -0.02
YBX3-207ENST00000539204 CNMDO75829 334 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms