RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 LETM1O95202 739 aaPredicted RBP29.68■■■□□ 2.34
KLHL42-202ENST00000539176 FAM47AQ5JRC9 791 aa29.68■■■□□ 2.34
KLHL42-202ENST00000539176 TMEM87BQ96K49 555 aa29.68■■■□□ 2.34
KLHL42-202ENST00000539176 PRMT6Q96LA8 375 aaPredicted RBP29.68■■■□□ 2.34
KLHL42-202ENST00000539176 TDRD3Q9H7E2 651 aaKnown RBP29.68■■■□□ 2.34
KLHL42-202ENST00000539176 LY9Q9HBG7 655 aa29.68■■■□□ 2.34
KLHL42-202ENST00000539176 NCOA5Q9HCD5 579 aaKnown RBP29.68■■■□□ 2.34
KLHL42-202ENST00000539176 CTDNEP1O95476 244 aa29.68■■■□□ 2.34
KLHL42-202ENST00000539176 NASPP49321 788 aaPredicted RBP29.68■■■□□ 2.34
KLHL42-202ENST00000539176 CCDC183Q5T5S1 534 aa29.68■■■□□ 2.34
KLHL42-202ENST00000539176 ROBO3Q96MS0 1386 aa29.67■■■□□ 2.34
KLHL42-202ENST00000539176 SHTN1A0MZ66 631 aa29.67■■■□□ 2.34
KLHL42-202ENST00000539176 ORC4O43929 436 aa29.67■■■□□ 2.34
KLHL42-202ENST00000539176 ZFPM1Q8IX07 1006 aa29.67■■■□□ 2.34
KLHL42-202ENST00000539176 SYCE3A1L190 88 aa29.66■■■□□ 2.34
KLHL42-202ENST00000539176 PDE4BQ07343 736 aa29.66■■■□□ 2.34
KLHL42-202ENST00000539176 FERMT3Q86UX7 667 aa29.66■■■□□ 2.34
KLHL42-202ENST00000539176 RESTQ13127 1097 aa29.65■■■□□ 2.34
KLHL42-202ENST00000539176 RGS22Q8NE09 1264 aa29.65■■■□□ 2.34
KLHL42-202ENST00000539176 AGBL3Q8NEM8 1001 aa29.65■■■□□ 2.34
KLHL42-202ENST00000539176 ANP32BQ92688 251 aaKnown RBP29.65■■■□□ 2.34
KLHL42-202ENST00000539176 DDX11Q96FC9 970 aa29.65■■■□□ 2.34
KLHL42-202ENST00000539176 GOLGA8BA8MQT2 603 aa29.65■■■□□ 2.34
KLHL42-202ENST00000539176 PCP11498 1178 aaKnown RBP29.65■■■□□ 2.34
KLHL42-202ENST00000539176 TCP10Q12799 353 aa29.65■■■□□ 2.34
KLHL42-202ENST00000539176 OSBPL5Q9H0X9 879 aaPredicted RBP29.65■■■□□ 2.34
KLHL42-202ENST00000539176 NFXL1Q6ZNB6 911 aa29.64■■■□□ 2.34
KLHL42-202ENST00000539176 UBAC1Q9BSL1 405 aa29.64■■■□□ 2.34
KLHL42-202ENST00000539176 HDAC9Q9UKV0 1011 aa29.64■■■□□ 2.34
KLHL42-202ENST00000539176 HPS5Q9UPZ3 1129 aa29.64■■■□□ 2.34
KLHL42-202ENST00000539176 OGFOD1Q8N543 542 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 FAM198AQ9UFP1 575 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 TNKSO95271 1327 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 NMT2O60551 498 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 RXRAP19793 462 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 TNIP1Q15025 636 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 MYL10Q9BUA6 226 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 MKNK2Q9HBH9 465 aa29.63■■■□□ 2.33
KLHL42-202ENST00000539176 SPDYE2BA6NHP3 402 aa29.62■■■□□ 2.33
KLHL42-202ENST00000539176 SPDYE6P0CI01 402 aa29.62■■■□□ 2.33
KLHL42-202ENST00000539176 YBX3P16989 372 aaKnown RBP eCLIP29.62■■■□□ 2.33
KLHL42-202ENST00000539176 WTAPQ15007 396 aa29.62■■■□□ 2.33
KLHL42-202ENST00000539176 ATL3Q6DD88 541 aa29.62■■■□□ 2.33
KLHL42-202ENST00000539176 GJA3Q9Y6H8 435 aa29.62■■■□□ 2.33
KLHL42-202ENST00000539176 ZNF541Q9H0D2 1346 aa29.62■■■□□ 2.33
KLHL42-202ENST00000539176 FZD9O00144 591 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 PPFIA3O75145 1194 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 CDK8P49336 464 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 SART3Q15020 963 aaKnown RBP29.61■■■□□ 2.33
KLHL42-202ENST00000539176 DLGAP5Q15398 846 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 C16orf86Q6ZW13 317 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 ZSCAN10Q96SZ4 725 aaPredicted RBP29.61■■■□□ 2.33
KLHL42-202ENST00000539176 MTA3Q9BTC8 594 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 CLRN2A0PK11 232 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 SLURP2P0DP57 97 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 SEC23AQ15436 765 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 APOA5Q6Q788 366 aa29.61■■■□□ 2.33
KLHL42-202ENST00000539176 SBF1O95248 1867 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 ERICH2A1L162 156 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 TSPY2A6NKD2 308 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 LIFRP42702 1097 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 EIF6P56537 245 aaKnown RBP29.6■■■□□ 2.33
KLHL42-202ENST00000539176 TTC6Q86TZ1 520 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 ENAHQ8N8S7 591 aaPredicted RBP29.6■■■□□ 2.33
KLHL42-202ENST00000539176 IDI2Q9BXS1 227 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 CFAP45Q9UL16 551 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 SRCAPQ6ZRS2 3230 aa29.6■■■□□ 2.33
KLHL42-202ENST00000539176 RASA1P20936 1047 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 TFAP4Q01664 338 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 CCDC173Q0VFZ6 552 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 SGMS1Q86VZ5 419 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 CCDC144CPQ8IYA2 1237 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 SPATA32Q96LK8 384 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 CCDC69A6NI79 296 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 MICU3Q86XE3 530 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 TSPY26PQ9H489 355 aa29.59■■■□□ 2.33
KLHL42-202ENST00000539176 CPLX1O14810 134 aa29.58■■■□□ 2.33
KLHL42-202ENST00000539176 GMPSP49915 693 aaPredicted RBP29.58■■■□□ 2.33
KLHL42-202ENST00000539176 SH3BP5LQ7L8J4 393 aa29.58■■■□□ 2.33
KLHL42-202ENST00000539176 IQCA1Q86XH1 822 aa29.58■■■□□ 2.33
KLHL42-202ENST00000539176 DICER1Q9UPY3 1922 aaKnown RBP29.58■■■□□ 2.33
KLHL42-202ENST00000539176 UTRNP46939 3433 aa29.57■■■□□ 2.32
KLHL42-202ENST00000539176 DDTLA6NHG4 134 aaPredicted RBP29.57■■■□□ 2.32
KLHL42-202ENST00000539176 RBSNQ9H1K0 784 aa29.57■■■□□ 2.32
KLHL42-202ENST00000539176 SIPA1L1O43166 1804 aa29.57■■■□□ 2.32
KLHL42-202ENST00000539176 CDKL5O76039 1030 aa29.57■■■□□ 2.32
KLHL42-202ENST00000539176 LMNB1P20700 586 aa29.57■■■□□ 2.32
KLHL42-202ENST00000539176 ZNF444Q8N0Y2 327 aaPredicted RBP29.57■■■□□ 2.32
KLHL42-202ENST00000539176 LEO1Q8WVC0 666 aaPredicted RBP29.57■■■□□ 2.32
KLHL42-202ENST00000539176 ZNF70Q9UC06 446 aaPredicted RBP29.57■■■□□ 2.32
KLHL42-202ENST00000539176 SLC12A7Q9Y666 1083 aa29.57■■■□□ 2.32
KLHL42-202ENST00000539176 TCP10L2B9ZVM9 353 aa29.56■■■□□ 2.32
KLHL42-202ENST00000539176 ZBTB43O43298 467 aa29.56■■■□□ 2.32
KLHL42-202ENST00000539176 EGFRP00533 1210 aa29.55■■■□□ 2.32
KLHL42-202ENST00000539176 METAP2P50579 478 aaKnown RBP eCLIP29.55■■■□□ 2.32
KLHL42-202ENST00000539176 GABPAQ06546 454 aa29.55■■■□□ 2.32
KLHL42-202ENST00000539176 CPLX2Q6PUV4 134 aaKnown RBP29.55■■■□□ 2.32
KLHL42-202ENST00000539176 ZSCAN29Q8IWY8 852 aaPredicted RBP29.55■■■□□ 2.32
KLHL42-202ENST00000539176 MYH8P13535 1937 aa29.55■■■□□ 2.32
KLHL42-202ENST00000539176 RBM26Q5T8P6 1007 aaKnown RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms