RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 FAM151AQ8WW52 585 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 PDRG1Q9NUG6 133 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 SUGT1Q9Y2Z0 365 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 GPR75-ASB3A0A0A6YYF3 556 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 NMT2O60551 498 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 FLOT1O75955 427 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 SEC24BO95487 1268 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 CDK8P49336 464 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 CREB3L3Q68CJ9 461 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 CLMNQ96JQ2 1002 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 PRC1O43663 620 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 TRPA1O75762 1119 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 AK9Q5TCS8 1911 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 TAF1P21675 1872 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 AOX1Q06278 1338 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
GGA3-202ENST00000538886 CMTR1Q8N1G2 835 aaKnown RBP10.24□□□□□ -0.77
GGA3-202ENST00000538886 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 AKNAD1Q5T1N1 836 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.24□□□□□ -0.77
GGA3-202ENST00000538886 CERS3Q8IU89 383 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 FOXP4Q8IVH2 680 aaPredicted RBP10.24□□□□□ -0.77
GGA3-202ENST00000538886 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 KRT23Q9C075 422 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 CGNQ9P2M7 1197 aaKnown RBP10.24□□□□□ -0.77
GGA3-202ENST00000538886 GOLGA8BA8MQT2 603 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 GSG1L2A8MUP6 293 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 MCM5P33992 734 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 EVX2Q03828 476 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 CCDC174Q6PII3 467 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 SLX4Q8IY92 1834 aa10.24□□□□□ -0.77
GGA3-202ENST00000538886 LTBP3Q9NS15 1303 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 UQCRHLA0A096LP55 91 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 UQCRHP07919 91 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 ASNSP08243 561 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 CTR9Q6PD62 1173 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 ANKRD13AQ8IZ07 590 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 C4AP0C0L4 1744 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 KLF18A0A0U1RQI7 1052 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 SNAP25P60880 206 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 KRT32Q14532 448 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
GGA3-202ENST00000538886 UBA5Q9GZZ9 404 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 AS3MTQ9HBK9 375 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
GGA3-202ENST00000538886 TMEM88BA6NKF7 163 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 H3BQV1 296 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 AKR1B1P15121 316 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 MTMR2Q13614 643 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 USH1GQ495M9 461 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 IFFO2Q5TF58 517 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 KCTD1Q719H9 257 aa10.23□□□□□ -0.77
GGA3-202ENST00000538886 UBR3Q6ZT12 1888 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 SLC16A2P36021 539 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 CBX1P83916 185 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 SMAP1Q8IYB5 467 aaPredicted RBP10.22□□□□□ -0.77
GGA3-202ENST00000538886 CPVLQ9H3G5 476 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 CCL15-CCL14A0A0B4J2E2 113 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 GOLGA8AA7E2F4 631 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 CCL15Q16663 113 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 ZNF771Q7L3S4 317 aaPredicted RBP10.22□□□□□ -0.77
GGA3-202ENST00000538886 GRPEL1Q9HAV7 217 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
GGA3-202ENST00000538886 TCEAL9Q9UHQ7 104 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 WNK3Q9BYP7 1800 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
GGA3-202ENST00000538886 GUCY1B3Q02153 619 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 TRIM29Q14134 588 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 TAF1CQ15572 869 aaPredicted RBP10.22□□□□□ -0.77
GGA3-202ENST00000538886 NSMFQ6X4W1 530 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
GGA3-202ENST00000538886 OPTNQ96CV9 577 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 CNNM2Q9H8M5 875 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 FAM198AQ9UFP1 575 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 IVNS1ABPQ9Y6Y0 642 aa10.22□□□□□ -0.77
GGA3-202ENST00000538886 AFDNP55196 1824 aaKnown RBP10.21□□□□□ -0.77
GGA3-202ENST00000538886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.21□□□□□ -0.77
GGA3-202ENST00000538886 VPS37CA5D8V6 355 aaPredicted RBP10.21□□□□□ -0.77
GGA3-202ENST00000538886 TMEM232C9JQI7 657 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 SLC27A2O14975 620 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 CYP21A2P08686 494 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 APOBRQ0VD83 1088 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 Q6ZUG5 572 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 C15orf52Q6ZUT6 534 aaKnown RBP10.21□□□□□ -0.77
GGA3-202ENST00000538886 NECAB1Q8N987 351 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 FMNL1O95466 1100 aaPredicted RBP10.21□□□□□ -0.77
GGA3-202ENST00000538886 ZRSR1Q15695 479 aaKnown RBP10.21□□□□□ -0.77
GGA3-202ENST00000538886 OSBPL3Q9H4L5 887 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
GGA3-202ENST00000538886 E7EWF7 191 aa10.21□□□□□ -0.78
GGA3-202ENST00000538886 IGSF3O75054 1194 aa10.21□□□□□ -0.78
GGA3-202ENST00000538886 SHROOM1Q2M3G4 852 aaPredicted RBP10.21□□□□□ -0.78
GGA3-202ENST00000538886 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.78
GGA3-202ENST00000538886 UIMC1Q96RL1 719 aa10.21□□□□□ -0.78
GGA3-202ENST00000538886 IL25Q9H293 177 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms