RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 MICALL1Q8N3F8 863 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 KLHDC4Q8TBB5 520 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 SMARCC1Q92922 1105 aaPredicted RBP10.21□□□□□ -0.77
SNHG1-209ENST00000538654 CTAGE1Q96RT6 745 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 MARF1Q9Y4F3 1742 aaKnown RBP10.21□□□□□ -0.77
SNHG1-209ENST00000538654 NEURL1BA8MQ27 555 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 PPFIA3O75145 1194 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 PHACTR2O75167 634 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 RECKO95980 971 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 GSCP56915 257 aaPredicted RBP10.21□□□□□ -0.78
SNHG1-209ENST00000538654 GCKRQ14397 625 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 PTPAQ15257 358 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 IMMTQ16891 758 aaKnown RBP10.21□□□□□ -0.78
SNHG1-209ENST00000538654 PLEKHO1Q53GL0 409 aaPredicted RBP10.21□□□□□ -0.78
SNHG1-209ENST00000538654 ZNF280DQ6N043 979 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 POTEDQ86YR6 584 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 DBNDD2Q9BQY9 259 aa10.21□□□□□ -0.78
SNHG1-209ENST00000538654 IRX2Q9BZI1 471 aaPredicted RBP10.21□□□□□ -0.78
SNHG1-209ENST00000538654 GNL3LQ9NVN8 582 aaKnown RBP10.21□□□□□ -0.78
SNHG1-209ENST00000538654 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 SHOX2O60902 331 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PDE4BQ07343 736 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 SF3B2Q13435 895 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 POSTNQ15063 836 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 CCDC96Q2M329 555 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 FILIP1LQ4L180 1135 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 AMOTQ4VCS5 1084 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 CPLX2Q6PUV4 134 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 CHST3Q7LGC8 479 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 RPGRIP1Q96KN7 1286 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MAF1Q9H063 256 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 SUGCTQ9HAC7 445 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MAN1B1Q9UKM7 699 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 ADAMTS13Q76LX8 1427 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 DDX60Q8IY21 1712 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 CCDC196A0A1B0GTZ2 297 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 EBAG9O00559 213 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 CLGNO14967 610 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PRC1O43663 620 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 IGKV5-2P06315 115 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PLCD1P51178 756 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MTF1Q14872 753 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TCEAL1Q15170 157 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PTPN21Q16825 1174 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PTPROQ16827 1216 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 WWC2Q6AWC2 1192 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 RAD9BQ6WBX8 426 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 VPS37DQ86XT2 251 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TMTC1Q8IUR5 882 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 SLC35F6Q8N357 371 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 IGSF22Q8N9C0 903 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MAP3K14Q99558 947 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TACO1Q9BSH4 297 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 KLF15Q9UIH9 416 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MYO6Q9UM54 1294 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 C4AP0C0L4 1744 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 C4BP0C0L5 1744 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TARSL2A2RTX5 802 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 A6NNZ2 444 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 PRPF6O94906 941 aaKnown RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 FECHP22830 423 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TRIM29Q14134 588 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 MORC3Q14149 939 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 TUBB8Q3ZCM7 444 aa10.2□□□□□ -0.78
SNHG1-209ENST00000538654 FOXP4Q8IVH2 680 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 ZNF622Q969S3 477 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNHG1-209ENST00000538654 LTN1O94822 1766 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 KDM6AO15550 1401 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 TMEM2Q9UHN6 1383 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 GOLIM4O00461 696 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 MFAP3LO75121 409 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 BMP6P22004 513 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 CDC27P30260 824 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 C1orf141Q5JVX7 400 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 GBP6Q6ZN66 633 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 RALYLQ86SE5 291 aaKnown RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 ANKRD20A12PQ8NF67 263 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 ALG1Q9BT22 464 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 NDUFB9Q9Y6M9 179 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 RGPD8O14715 1765 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 MAST3O60307 1309 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 ITIH6Q6UXX5 1313 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 CDHR2Q9BYE9 1310 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 RNMTO43148 476 aaKnown RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 KIF1CO43896 1103 aaKnown RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 SYF2O95926 243 aaKnown RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 SARSP49591 514 aaKnown RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 RBL2Q08999 1139 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 TRDNQ13061 729 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 STIM1Q13586 685 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms