RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 CCDC69A6NI79 296 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 SLURP2P0DP57 97 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 GJB2P29033 226 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 RBM26Q5T8P6 1007 aaKnown RBP22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 ZSCAN29Q8IWY8 852 aaPredicted RBP22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 GPC2Q8N158 579 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 MYL10Q9BUA6 226 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 IL17RBQ9NRM6 502 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 SLC12A7Q9Y666 1083 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 SIPA1L1O43166 1804 aa22.86■■□□□ 1.25
EFCAB11-202ENST00000538485 MYO1BO43795 1136 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 TSPY3P0CV98 308 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 TSPY8P0CW00 308 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 RXRAP19793 462 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 SAMD7Q7Z3H4 446 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 MICU3Q86XE3 530 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 EHD4Q9H223 541 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 PI4KBQ9UBF8 816 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 ATRNL1Q5VV63 1379 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 ZBTB43O43298 467 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 CTDNEP1O95476 244 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 VEZTQ9HBM0 779 aa22.85■■□□□ 1.25
EFCAB11-202ENST00000538485 JAK2O60674 1132 aa22.84■■□□□ 1.25
EFCAB11-202ENST00000538485 IFIT1BQ5T764 474 aaKnown RBP22.84■■□□□ 1.25
EFCAB11-202ENST00000538485 RCSD1Q6JBY9 416 aa22.84■■□□□ 1.25
EFCAB11-202ENST00000538485 DNAJC18Q9H819 358 aa22.84■■□□□ 1.25
EFCAB11-202ENST00000538485 SHMT1P34896 483 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 METAP2P50579 478 aaKnown RBP eCLIP22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 RAB3GAP1Q15042 981 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 GPR162Q16538 588 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 FKBP1CQ5VVH2 108 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 NSUN7Q8NE18 718 aaKnown RBP22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 LLPHQ9BRT6 129 aaKnown RBP22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 SWAP70Q9UH65 585 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 CNTNAP1P78357 1384 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 MYH8P13535 1937 aa22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 COL2A1P02458 1487 aaPredicted RBP22.83■■□□□ 1.25
EFCAB11-202ENST00000538485 SOCS7O14512 581 aa22.83■■□□□ 1.24
EFCAB11-202ENST00000538485 TBC1D10BQ4KMP7 808 aaPredicted RBP22.83■■□□□ 1.24
EFCAB11-202ENST00000538485 C9orf131Q5VYM1 1079 aa22.83■■□□□ 1.24
EFCAB11-202ENST00000538485 CCDC144CPQ8IYA2 1237 aa22.83■■□□□ 1.24
EFCAB11-202ENST00000538485 FAM151AQ8WW52 585 aa22.83■■□□□ 1.24
EFCAB11-202ENST00000538485 TCP11L1Q9NUJ3 509 aa22.83■■□□□ 1.24
EFCAB11-202ENST00000538485 NUCB2P80303 420 aa22.82■■□□□ 1.24
EFCAB11-202ENST00000538485 ZNF654Q8IZM8 581 aa22.82■■□□□ 1.24
EFCAB11-202ENST00000538485 NEDD1Q8NHV4 660 aa22.82■■□□□ 1.24
EFCAB11-202ENST00000538485 SMARCC2Q8TAQ2 1214 aa22.82■■□□□ 1.24
EFCAB11-202ENST00000538485 FAM196BA6NMK8 535 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 CDC27P30260 824 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 ADD1P35611 737 aaKnown RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 SYNE3Q6ZMZ3 975 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 CRACR2BQ8N4Y2 399 aaPredicted RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 CSRNP1Q96S65 589 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 GPRC5DQ9NZD1 345 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 ZDHHC9Q9Y397 364 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 DHX16O60231 1041 aaKnown RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 PPFIA3O75145 1194 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 DDNO94850 711 aaPredicted RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 METTL16Q86W50 562 aaKnown RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 DGKHQ86XP1 1220 aa22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 FOXP4Q8IVH2 680 aaPredicted RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 FAM217BQ9NTX9 383 aaPredicted RBP22.81■■□□□ 1.24
EFCAB11-202ENST00000538485 PTPDC1A2A3K4 754 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 GOLGA8AA7E2F4 631 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 H7C1D1 291 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 SYT1P21579 422 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 KIF4BQ2VIQ3 1234 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 FAM83AQ86UY5 434 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 CHMP4CQ96CF2 233 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 DDX11Q96FC9 970 aa22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
EFCAB11-202ENST00000538485 NID2Q14112 1375 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 AKR1B1P15121 316 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 TROAPQ12815 778 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 NUP133Q8WUM0 1156 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 ANKS1AQ92625 1134 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 TMEM39BQ9GZU3 492 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 SCAF8Q9UPN6 1271 aaKnown RBP22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 ASTN2O75129 1339 aaPredicted RBP22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 CPLX1O14810 134 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 RCAN1P53805 252 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 CDAN1Q8IWY9 1227 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 TNPO1Q92973 898 aaKnown RBP22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 STX8Q9UNK0 236 aa22.79■■□□□ 1.24
EFCAB11-202ENST00000538485 PLIN4Q96Q06 1357 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 BRD1O95696 1058 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 EPS15P42566 896 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 CCDC178Q5BJE1 867 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 CATIPQ7Z7H3 387 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 FANCBQ8NB91 859 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 CEP95Q96GE4 821 aa22.78■■□□□ 1.24
EFCAB11-202ENST00000538485 NTRK3Q16288 839 aa22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 TATDN1Q6P1N9 297 aa22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 STX6O43752 255 aa22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 FDPSP14324 419 aaKnown RBP22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 LARP1BQ659C4 914 aaKnown RBP22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 TRPM4Q8TD43 1214 aa22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
EFCAB11-202ENST00000538485 PGAP2Q9UHJ9 254 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms