RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 MICU3Q86XE3 530 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 DHX40Q8IX18 779 aaKnown RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 WASF1Q92558 559 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 PHKBQ93100 1093 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
DDB1-211ENST00000538280 BRIP1Q9BX63 1249 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 NYXQ9GZU5 481 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 INCENPQ9NQS7 918 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 GNL3LQ9NVN8 582 aaKnown RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 PYCARDQ9ULZ3 195 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 R3HCC1Q9Y3T6 440 aaKnown RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 SLC12A7Q9Y666 1083 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 SCN4AP35499 1836 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 LTBP1Q14766 1721 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 MAGEB6P1A0A0J9YX57 407 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 A0A1B0GVL5 298 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 WDHD1O75717 1129 aaPredicted RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 DDNO94850 711 aaPredicted RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 PCP11498 1178 aaKnown RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 PFKFB1P16118 471 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 RXRAP19793 462 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 GYG1P46976 350 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 SSRP1Q08945 709 aaKnown RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 WTAPQ15007 396 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 PPP2R5BQ15173 497 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 SF3A1Q15459 793 aaKnown RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 NFXL1Q6ZNB6 911 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 ELOA2Q8IYF1 753 aaPredicted RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 CELF1Q92879 486 aaKnown RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.7
DDB1-211ENST00000538280 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
DDB1-211ENST00000538280 LRP2BPQ9P2M1 347 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 TUBE1Q9UJT0 475 aa10.69□□□□□ -0.7
DDB1-211ENST00000538280 H0YIN7 160 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 GOLGA6L19H0YKK7 550 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 CUTAO60888 179 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 ZNF202O95125 648 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 DEXIO95424 95 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 MMP1P03956 469 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 PTGS1P23219 599 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 NLRP12P59046 1061 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 SART3Q15020 963 aaKnown RBP10.68□□□□□ -0.7
DDB1-211ENST00000538280 RTN1Q16799 776 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 RESP18Q5W5W9 173 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 CEP57L1Q8IYX8 460 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 MPNDQ8N594 471 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 SPC24Q8NBT2 197 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 PRIMPOLQ96LW4 560 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 MYL10Q9BUA6 226 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 SLC26A6Q9BXS9 759 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
DDB1-211ENST00000538280 COL4A5P29400 1685 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 MYH6P13533 1939 aa10.68□□□□□ -0.7
DDB1-211ENST00000538280 BAZ2AQ9UIF9 1905 aaKnown RBP10.68□□□□□ -0.7
DDB1-211ENST00000538280 CCDC196A0A1B0GTZ2 297 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 FOXN1O15353 648 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 GTF2F1P35269 517 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDB1-211ENST00000538280 TRIM29Q14134 588 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 CAVIN4Q5BKX8 364 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 SHC4Q6S5L8 630 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 CCDC186Q7Z3E2 898 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 CRACR2BQ8N4Y2 399 aaPredicted RBP10.67□□□□□ -0.7
DDB1-211ENST00000538280 MYRIPQ8NFW9 859 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 ESR2Q92731 530 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 RNF26Q9BY78 433 aaPredicted RBP10.67□□□□□ -0.7
DDB1-211ENST00000538280 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 FOXP1Q9H334 677 aaPredicted RBP10.67□□□□□ -0.7
DDB1-211ENST00000538280 RAI14Q9P0K7 980 aa10.67□□□□□ -0.7
DDB1-211ENST00000538280 CNTNAP1P78357 1384 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 THSD7BQ9C0I4 1608 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 TNKSO95271 1327 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 ZNF541Q9H0D2 1346 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 UQCRHLA0A096LP55 91 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 ERICH2A1L162 156 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 UBE2Q2LH0YL09 131 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 DYNC1I1O14576 645 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 ORC4O43929 436 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 UQCRHP07919 91 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 GUCY1A2P33402 732 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 NT5C2P49902 561 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 RPS8P62241 208 aaKnown RBP10.66□□□□□ -0.7
DDB1-211ENST00000538280 FUT2Q10981 343 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 CCDC144BQ3MJ40 725 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 NOSTRINQ8IVI9 506 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 CCDC144CPQ8IYA2 1237 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 C17orf53Q8N3J3 647 aaPredicted RBP10.66□□□□□ -0.7
DDB1-211ENST00000538280 AOPEPQ8N6M6 819 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms