RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 PTGS1P23219 599 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 PKN1Q16512 942 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 XDHP47989 1333 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 AFF2P51816 1311 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 NLRP12P59046 1061 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 CCDC186Q7Z3E2 898 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 DRC7Q8IY82 874 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 CLIC6Q96NY7 704 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 PYCARDQ9ULZ3 195 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 MAST2Q6P0Q8 1798 aa13.16□□□□□ -0.3
SLC28A1-204ENST00000538177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 NT5C2P49902 561 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 EVX2Q03828 476 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 DPCR1Q3MIW9 517 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 AOPEPQ8N6M6 819 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 TRPC5Q9UL62 973 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 MORC2Q9Y6X9 1032 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 XBP1P17861 261 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 PTPREP23469 700 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 NR5A1Q13285 461 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 CCDC88AQ3V6T2 1871 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.3
SLC28A1-204ENST00000538177 LDHBP07195 334 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 CYP2D6P10635 497 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 PHF20Q9BVI0 1012 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 FBXO2Q9UK22 296 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 KCNH3Q9ULD8 1083 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 PLEKHA8P1O95397 391 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 GYS1P13807 737 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 PPP4CP60510 307 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 GSTO1P78417 241 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-204ENST00000538177 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 CEP131Q9UPN4 1083 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 BIN1O00499 593 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 SERPINB2P05120 415 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 GPSM2P81274 684 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 CABP5Q9NP86 173 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 VPS54Q9P1Q0 977 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 LAMB1P07942 1786 aa13.13□□□□□ -0.31
SLC28A1-204ENST00000538177 MYH6P13533 1939 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 NMT2O60551 498 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 LDHCP07864 332 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 KRT2P35908 639 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 NCAPHQ15003 741 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 ANKS1AQ92625 1134 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
SLC28A1-204ENST00000538177 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 IKBKBO14920 756 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 BAG3O95817 575 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 ST5P78524 1137 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 LRMPQ12912 555 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 GRIK5Q16478 980 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms