RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 MAGEB6P1A0A0J9YX57 407 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 GDF11O95390 407 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 JAG1P78504 1218 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 MTMR2Q13614 643 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 SLC4A8Q2Y0W8 1093 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 SLC9C2Q5TAH2 1124 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
LRRK1-211ENST00000538064 ZNF532Q9HCE3 1301 aa18.08■□□□□ 0.49
LRRK1-211ENST00000538064 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 ATP5JP18859 108 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 BACE1P56817 501 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 PRKCZQ05513 592 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 FAM110CQ1W6H9 321 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 SHROOM1Q2M3G4 852 aaPredicted RBP18.08■□□□□ 0.48
LRRK1-211ENST00000538064 RAET1EQ8TD07 263 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 SERPINB13Q9UIV8 391 aa18.08■□□□□ 0.48
LRRK1-211ENST00000538064 TATDN1Q6P1N9 297 aa18.07■□□□□ 0.48
LRRK1-211ENST00000538064 TTC6Q86TZ1 520 aa18.07■□□□□ 0.48
LRRK1-211ENST00000538064 CRNKL1Q9BZJ0 848 aaKnown RBP18.07■□□□□ 0.48
LRRK1-211ENST00000538064 MKI67P46013 3256 aaKnown RBP18.07■□□□□ 0.48
LRRK1-211ENST00000538064 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
LRRK1-211ENST00000538064 EN2P19622 333 aaPredicted RBP18.06■□□□□ 0.48
LRRK1-211ENST00000538064 GCLCP48506 637 aaPredicted RBP18.06■□□□□ 0.48
LRRK1-211ENST00000538064 PRPF38BQ5VTL8 546 aaKnown RBP18.06■□□□□ 0.48
LRRK1-211ENST00000538064 ANKRD13CQ8N6S4 541 aa18.06■□□□□ 0.48
LRRK1-211ENST00000538064 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
LRRK1-211ENST00000538064 HAUS7Q99871 368 aa18.06■□□□□ 0.48
LRRK1-211ENST00000538064 BCL11AQ9H165 835 aa18.06■□□□□ 0.48
LRRK1-211ENST00000538064 ASCC2Q9H1I8 757 aaPredicted RBP18.06■□□□□ 0.48
LRRK1-211ENST00000538064 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
LRRK1-211ENST00000538064 TMOD4Q9NZQ9 345 aa18.06■□□□□ 0.48
LRRK1-211ENST00000538064 C19orf81C9J6K1 198 aa18.05■□□□□ 0.48
LRRK1-211ENST00000538064 USP17L10C9JJH3 530 aa18.05■□□□□ 0.48
LRRK1-211ENST00000538064 GRK4P32298 578 aa18.05■□□□□ 0.48
LRRK1-211ENST00000538064 ADD2P35612 726 aa18.05■□□□□ 0.48
LRRK1-211ENST00000538064 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
LRRK1-211ENST00000538064 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
LRRK1-211ENST00000538064 TNPO2O14787 897 aaKnown RBP18.04■□□□□ 0.48
LRRK1-211ENST00000538064 GH2P01242 217 aa18.04■□□□□ 0.48
LRRK1-211ENST00000538064 HOXA7P31268 230 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-211ENST00000538064 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.04■□□□□ 0.48
LRRK1-211ENST00000538064 GABRQQ9UN88 632 aa18.04■□□□□ 0.48
LRRK1-211ENST00000538064 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
LRRK1-211ENST00000538064 MYCP01106 439 aaPredicted RBP18.03■□□□□ 0.48
LRRK1-211ENST00000538064 SHMT1P34896 483 aa18.03■□□□□ 0.48
LRRK1-211ENST00000538064 PLCD1P51178 756 aa18.03■□□□□ 0.48
LRRK1-211ENST00000538064 IRX3P78415 501 aaPredicted RBP18.03■□□□□ 0.48
LRRK1-211ENST00000538064 GABPAQ06546 454 aa18.03■□□□□ 0.48
LRRK1-211ENST00000538064 IRF5Q13568 498 aa18.03■□□□□ 0.48
LRRK1-211ENST00000538064 DCTPP1Q9H773 170 aa18.03■□□□□ 0.48
LRRK1-211ENST00000538064 POLR3DP05423 398 aaPredicted RBP18.02■□□□□ 0.48
LRRK1-211ENST00000538064 FLT3LGP49771 235 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 ABCB5Q2M3G0 1257 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
LRRK1-211ENST00000538064 USP17L2Q6R6M4 530 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 SDR42E1Q8WUS8 393 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 COA7Q96BR5 231 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 ARMT1Q9H993 441 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 DCP1AQ9NPI6 582 aaPredicted RBP18.02■□□□□ 0.48
LRRK1-211ENST00000538064 MCM9Q9NXL9 1143 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
LRRK1-211ENST00000538064 MBD4O95243 580 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
LRRK1-211ENST00000538064 UBXN2AP68543 259 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 UBE3CQ15386 1083 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 MTFR1Q15390 333 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 PXYLP1Q8TE99 480 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 ECHDC1Q9NTX5 307 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 TAOK2Q9UL54 1235 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 A0A0G2JMZ2 1700 aa18.01■□□□□ 0.47
LRRK1-211ENST00000538064 ADCY3O60266 1144 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 HERVK_113P62684 666 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 GTF3C2Q8WUA4 911 aaPredicted RBP18■□□□□ 0.47
LRRK1-211ENST00000538064 SHISA4Q96DD7 197 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 GPATCH3Q96I76 525 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 FEZ1Q99689 392 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 CABP5Q9NP86 173 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 EMILIN3Q9NT22 766 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 PARP14Q460N5 1801 aa18■□□□□ 0.47
LRRK1-211ENST00000538064 CCL5P13501 91 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 USP14P54578 494 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 EVX2Q03828 476 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 SLFNL1Q499Z3 407 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 ZSCAN25Q6NSZ9 544 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 P2RX7Q99572 595 aaKnown RBP17.99■□□□□ 0.47
LRRK1-211ENST00000538064 KIAA1683Q9H0B3 1180 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 ATP8A2Q9NTI2 1148 aa17.99■□□□□ 0.47
LRRK1-211ENST00000538064 BIN2Q9UBW5 565 aaPredicted RBP17.99■□□□□ 0.47
LRRK1-211ENST00000538064 GREB1LQ9C091 1923 aaPredicted RBP17.99■□□□□ 0.47
LRRK1-211ENST00000538064 RLFQ13129 1914 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 CHGBP05060 677 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 GJB1P08034 283 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 CYP2D6P10635 497 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 ELNP15502 786 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 GUCY1A2P33402 732 aa17.98■□□□□ 0.47
LRRK1-211ENST00000538064 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms