RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 YBX3P16989 372 aaKnown RBP eCLIP7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 MAPK8IP1Q9UQF2 711 aa7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 SNX11Q9Y5W9 270 aa7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 CAPN6Q9Y6Q1 641 aa7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 H3BS24 57 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 ZNF124Q15973 351 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 LETMD1Q6P1Q0 360 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 SLC23A3Q6PIS1 610 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 FBXO33Q7Z6M2 555 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 CARS2Q9HA77 564 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 CORINQ9Y5Q5 1042 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 ST14Q9Y5Y6 855 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 SNCAIPQ9Y6H5 919 aa7.73□□□□□ -1.17
SRGAP1-203ENST00000537585 BTBD11A6QL63 1104 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 CBX7O95931 251 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 CST3P01034 146 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 ZNF865P0CJ78 1059 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 CAP2P40123 477 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 RPS26P62854 115 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 JAG1P78504 1218 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 HID1Q8IV36 788 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 MFSD4AQ8N468 514 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 KCT2Q8NC54 265 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 CTNND2Q9UQB3 1225 aa7.72□□□□□ -1.17
SRGAP1-203ENST00000537585 CLCN7P51798 805 aa7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 DAB2P98082 770 aa7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 SFRP5Q5T4F7 317 aa7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 BNC2Q6ZN30 1099 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 PHC3Q8NDX5 983 aa7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 ASB11Q8WXH4 323 aa7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-203ENST00000537585 ZNF503-AS2A6NEH8 195 aa7.7□□□□□ -1.18
SRGAP1-203ENST00000537585 FAM155AB1AL88 458 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-203ENST00000537585 PGRP06401 933 aa7.7□□□□□ -1.18
SRGAP1-203ENST00000537585 FLAD1Q8NFF5 587 aa7.7□□□□□ -1.18
SRGAP1-203ENST00000537585 PSMD2Q13200 908 aa7.69□□□□□ -1.18
SRGAP1-203ENST00000537585 MFSD2AQ8NA29 543 aa7.69□□□□□ -1.18
SRGAP1-203ENST00000537585 ACSF2Q96CM8 615 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-203ENST00000537585 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
SRGAP1-203ENST00000537585 MIR1-1HGQ9H1L0 117 aa7.69□□□□□ -1.18
SRGAP1-203ENST00000537585 UPK3BL1B0FP48 263 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 UPK3BL2E5RIL1 263 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 BIN1O00499 593 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 TNK2Q07912 1038 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 C22orf34Q6ZV56 151 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 DNAJB8Q8NHS0 232 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 LIN37Q96GY3 246 aaPredicted RBP7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 Q96M66 194 aa7.68□□□□□ -1.18
SRGAP1-203ENST00000537585 LMNB1P20700 586 aa7.67□□□□□ -1.18
SRGAP1-203ENST00000537585 MRPL41Q8IXM3 137 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-203ENST00000537585 PPP1R13LQ8WUF5 828 aa7.67□□□□□ -1.18
SRGAP1-203ENST00000537585 FZD5Q13467 585 aa7.66□□□□□ -1.18
SRGAP1-203ENST00000537585 TAF1CQ15572 869 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-203ENST00000537585 TMC4Q7Z404 712 aa7.66□□□□□ -1.18
SRGAP1-203ENST00000537585 ZSWIM9Q86XI8 627 aa7.66□□□□□ -1.18
SRGAP1-203ENST00000537585 UBE2FQ969M7 185 aa7.66□□□□□ -1.18
SRGAP1-203ENST00000537585 ZSWIM5Q9P217 1185 aa7.66□□□□□ -1.18
SRGAP1-203ENST00000537585 FAM221AA4D161 298 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 PATL2C9JE40 543 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 DNAJA2O60884 412 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 F13A1P00488 732 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 PF4P02776 101 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 RPL6Q02878 288 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 MESP2Q0VG99 397 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 TSNAXIP1Q2TAA8 658 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 KCNK12Q9HB15 430 aa7.65□□□□□ -1.18
SRGAP1-203ENST00000537585 USP31Q70CQ4 1352 aa7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 ESR1P03372 595 aa7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 ST13P50502 369 aaKnown RBP7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 MCATQ8IVS2 390 aaKnown RBP7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 FBXO27Q8NI29 283 aa7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 RHOVQ96L33 236 aa7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 POLR3KQ9Y2Y1 108 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-203ENST00000537585 DNAJC25-GNG10A0A024R161 153 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 LRRN2O75325 713 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 CILPO75339 1184 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 ERVFC1P60507 584 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 CAMK2GQ13555 558 aaPredicted RBP7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 KCNMB1Q16558 191 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 MLANAQ16655 118 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 RALGPS1Q5JS13 557 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 TMEM40Q8WWA1 233 aa7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 NOC4LQ9BVI4 516 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-203ENST00000537585 LRRC10BA6NIK2 292 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 XPCQ01831 940 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 CRELD1Q96HD1 420 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 COPRSQ9NQ92 184 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 LMCD1Q9NZU5 365 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 SLAMF8Q9P0V8 285 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
SRGAP1-203ENST00000537585 PLCG1P19174 1290 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms