RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 COL9A3Q14050 684 aaPredicted RBP28.66■■■□□ 2.18
HMGA2-208ENST00000537429 RALYLQ86SE5 291 aaKnown RBP28.66■■■□□ 2.18
HMGA2-208ENST00000537429 ESR2Q92731 530 aa28.66■■■□□ 2.18
HMGA2-208ENST00000537429 JAKMIP1Q96N16 626 aaKnown RBP28.66■■■□□ 2.18
HMGA2-208ENST00000537429 RANBP6O60518 1105 aaKnown RBP28.65■■■□□ 2.18
HMGA2-208ENST00000537429 TM6SF1Q9BZW5 370 aa28.65■■■□□ 2.18
HMGA2-208ENST00000537429 ZSWIM5Q9P217 1185 aa28.65■■■□□ 2.18
HMGA2-208ENST00000537429 PASKQ96RG2 1323 aa28.65■■■□□ 2.18
HMGA2-208ENST00000537429 KDM4AO75164 1064 aa28.64■■■□□ 2.18
HMGA2-208ENST00000537429 CELF2O95319 508 aaKnown RBP28.64■■■□□ 2.18
HMGA2-208ENST00000537429 PSMA5P28066 241 aa28.64■■■□□ 2.18
HMGA2-208ENST00000537429 MAP3K11Q16584 847 aa28.64■■■□□ 2.18
HMGA2-208ENST00000537429 FAM47AQ5JRC9 791 aa28.64■■■□□ 2.18
HMGA2-208ENST00000537429 MB21D2Q8IYB1 491 aaPredicted RBP28.64■■■□□ 2.18
HMGA2-208ENST00000537429 AKR1B1P15121 316 aa28.64■■■□□ 2.17
HMGA2-208ENST00000537429 CAP2P40123 477 aa28.64■■■□□ 2.17
HMGA2-208ENST00000537429 TFAP4Q01664 338 aa28.64■■■□□ 2.17
HMGA2-208ENST00000537429 FSTL1Q12841 308 aa28.64■■■□□ 2.17
HMGA2-208ENST00000537429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.64■■■□□ 2.17
HMGA2-208ENST00000537429 WRNIP1Q96S55 665 aa28.64■■■□□ 2.17
HMGA2-208ENST00000537429 TSPY2A6NKD2 308 aa28.63■■■□□ 2.17
HMGA2-208ENST00000537429 HMGB1P09429 215 aaKnown RBP28.63■■■□□ 2.17
HMGA2-208ENST00000537429 JAG1P78504 1218 aa28.63■■■□□ 2.17
HMGA2-208ENST00000537429 CYB5R4Q7L1T6 521 aa28.63■■■□□ 2.17
HMGA2-208ENST00000537429 ZSWIM6Q9HCJ5 1215 aa28.63■■■□□ 2.17
HMGA2-208ENST00000537429 ANGEL1Q9UNK9 670 aaKnown RBP28.63■■■□□ 2.17
HMGA2-208ENST00000537429 TRPM7Q96QT4 1865 aa28.63■■■□□ 2.17
HMGA2-208ENST00000537429 CTNND1O60716 968 aaKnown RBP28.62■■■□□ 2.17
HMGA2-208ENST00000537429 GDF11O95390 407 aa28.62■■■□□ 2.17
HMGA2-208ENST00000537429 TSPY3P0CV98 308 aa28.62■■■□□ 2.17
HMGA2-208ENST00000537429 TSPY8P0CW00 308 aa28.62■■■□□ 2.17
HMGA2-208ENST00000537429 CASTP20810 708 aaKnown RBP28.62■■■□□ 2.17
HMGA2-208ENST00000537429 INPP5BP32019 993 aa28.62■■■□□ 2.17
HMGA2-208ENST00000537429 CST9Q5W186 159 aa28.62■■■□□ 2.17
HMGA2-208ENST00000537429 NEDD1Q8NHV4 660 aa28.62■■■□□ 2.17
HMGA2-208ENST00000537429 PAPPA2Q9BXP8 1791 aa28.61■■■□□ 2.17
HMGA2-208ENST00000537429 IREB2P48200 963 aaKnown RBP28.61■■■□□ 2.17
HMGA2-208ENST00000537429 ABCB5Q2M3G0 1257 aa28.61■■■□□ 2.17
HMGA2-208ENST00000537429 SHROOM1Q2M3G4 852 aaPredicted RBP28.61■■■□□ 2.17
HMGA2-208ENST00000537429 BLOC1S2Q6QNY1 142 aa28.61■■■□□ 2.17
HMGA2-208ENST00000537429 MOB2Q70IA6 237 aa28.61■■■□□ 2.17
HMGA2-208ENST00000537429 ARMC9Q7Z3E5 817 aa28.61■■■□□ 2.17
HMGA2-208ENST00000537429 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.61■■■□□ 2.17
HMGA2-208ENST00000537429 PLIN4Q96Q06 1357 aa28.61■■■□□ 2.17
HMGA2-208ENST00000537429 MCM5P33992 734 aa28.6■■■□□ 2.17
HMGA2-208ENST00000537429 FKBP1BP68106 108 aa28.6■■■□□ 2.17
HMGA2-208ENST00000537429 DHX32Q7L7V1 743 aaKnown RBP28.6■■■□□ 2.17
HMGA2-208ENST00000537429 GBA2Q9HCG7 927 aaPredicted RBP28.6■■■□□ 2.17
HMGA2-208ENST00000537429 GREB1LQ9C091 1923 aaPredicted RBP28.6■■■□□ 2.17
HMGA2-208ENST00000537429 GH2P01242 217 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 CPA1P15085 419 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 ANTXR2P58335 489 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 MAP3K9P80192 1104 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 EXOSC10Q01780 885 aaKnown RBP28.59■■■□□ 2.17
HMGA2-208ENST00000537429 RUFY3Q7L099 469 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 C2orf69Q8N8R5 385 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 ZKSCAN4Q969J2 545 aaPredicted RBP28.59■■■□□ 2.17
HMGA2-208ENST00000537429 MPHOSPH10O00566 681 aaKnown RBP28.59■■■□□ 2.17
HMGA2-208ENST00000537429 RPS6KB1P23443 525 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.59■■■□□ 2.17
HMGA2-208ENST00000537429 TMEM179Q6ZVK1 233 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 CHST3Q7LGC8 479 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 UPF3BQ9BZI7 483 aaKnown RBP28.59■■■□□ 2.17
HMGA2-208ENST00000537429 CABP5Q9NP86 173 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 GINM1Q9NU53 330 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 TCP11L1Q9NUJ3 509 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.59■■■□□ 2.17
HMGA2-208ENST00000537429 ZBTB21Q9ULJ3 1066 aa28.59■■■□□ 2.17
HMGA2-208ENST00000537429 IGKV6D-41A0A0C4DH26 115 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 ASNSP08243 561 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 GUCY1A2P33402 732 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 NOL9Q5SY16 702 aaKnown RBP28.58■■■□□ 2.17
HMGA2-208ENST00000537429 IQCA1Q86XH1 822 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 SCYL3Q8IZE3 742 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 IL17RBQ9NRM6 502 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 CYP46A1Q9Y6A2 500 aa28.58■■■□□ 2.17
HMGA2-208ENST00000537429 ATAD5Q96QE3 1844 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 OTOFQ9HC10 1997 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 PRC1O43663 620 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 DOCK1Q14185 1865 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 LDLRAD1Q5T700 205 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 ANKRD13AQ8IZ07 590 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 WDR19Q8NEZ3 1342 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 ZKSCAN3Q9BRR0 538 aa28.57■■■□□ 2.16
HMGA2-208ENST00000537429 UBE2Q2LH0YL09 131 aa28.56■■■□□ 2.16
HMGA2-208ENST00000537429 NMT2O60551 498 aa28.56■■■□□ 2.16
HMGA2-208ENST00000537429 VGLL4Q14135 290 aa28.56■■■□□ 2.16
HMGA2-208ENST00000537429 MTA3Q9BTC8 594 aa28.56■■■□□ 2.16
HMGA2-208ENST00000537429 UNCXA6NJT0 531 aa28.55■■■□□ 2.16
HMGA2-208ENST00000537429 SEPT2Q15019 361 aa28.55■■■□□ 2.16
HMGA2-208ENST00000537429 CEP95Q96GE4 821 aa28.55■■■□□ 2.16
HMGA2-208ENST00000537429 TCEANC2Q96MN5 208 aa28.55■■■□□ 2.16
HMGA2-208ENST00000537429 NOVP48745 357 aa28.54■■■□□ 2.16
HMGA2-208ENST00000537429 IGDCC4Q8TDY8 1250 aa28.54■■■□□ 2.16
HMGA2-208ENST00000537429 TMEM87BQ96K49 555 aa28.54■■■□□ 2.16
HMGA2-208ENST00000537429 ZSCAN10Q96SZ4 725 aaPredicted RBP28.54■■■□□ 2.16
HMGA2-208ENST00000537429 UBAC1Q9BSL1 405 aa28.54■■■□□ 2.16
HMGA2-208ENST00000537429 KANSL2Q9H9L4 492 aa28.54■■■□□ 2.16
HMGA2-208ENST00000537429 CSADQ9Y600 493 aa28.54■■■□□ 2.16
HMGA2-208ENST00000537429 SNCAIPQ9Y6H5 919 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms