RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 BRCA2P51587 3418 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 C19orf81C9J6K1 198 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 GJB1P08034 283 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 FLT3LGP49771 235 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.49
CCDC170-202ENST00000537358 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 TREML2Q5T2D2 321 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 MAGEB6Q8N7X4 407 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 PANK1Q8TE04 598 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 PXYLP1Q8TE99 480 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 HTATIP2Q9BUP3 242 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 WDR18Q9BV38 432 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 PIH1D3Q9NQM4 214 aaKnown RBP11.96□□□□□ -0.49
CCDC170-202ENST00000537358 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.49
CCDC170-202ENST00000537358 MKI67P46013 3256 aaKnown RBP11.96□□□□□ -0.49
CCDC170-202ENST00000537358 DOCK3Q8IZD9 2030 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 GJA8P48165 433 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 BACE1P56817 501 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 IRF5Q13568 498 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 MTMR2Q13614 643 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 CCAR1Q8IX12 1150 aaKnown RBP11.95□□□□□ -0.5
CCDC170-202ENST00000537358 CLASRPQ8N2M8 674 aaKnown RBP11.95□□□□□ -0.5
CCDC170-202ENST00000537358 ASCC2Q9H1I8 757 aaPredicted RBP11.95□□□□□ -0.5
CCDC170-202ENST00000537358 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
CCDC170-202ENST00000537358 SAP30BPQ9UHR5 308 aaKnown RBP11.95□□□□□ -0.5
CCDC170-202ENST00000537358 DDX19BQ9UMR2 479 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 GABRQQ9UN88 632 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
CCDC170-202ENST00000537358 USP17L10C9JJH3 530 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 INHAP05111 366 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 IFIT2P09913 472 aaKnown RBP11.94□□□□□ -0.5
CCDC170-202ENST00000537358 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 DYNLL1P63167 89 aaKnown RBP11.94□□□□□ -0.5
CCDC170-202ENST00000537358 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 TTC6Q86TZ1 520 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 METTL16Q86W50 562 aaKnown RBP11.94□□□□□ -0.5
CCDC170-202ENST00000537358 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
CCDC170-202ENST00000537358 MIGA1Q8NAN2 632 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 RHPN1Q8TCX5 695 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 GTF3C2Q8WUA4 911 aaPredicted RBP11.94□□□□□ -0.5
CCDC170-202ENST00000537358 DPF3Q92784 378 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
CCDC170-202ENST00000537358 GDF11O95390 407 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 ELNP15502 786 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 HABP4Q5JVS0 413 aaKnown RBP11.93□□□□□ -0.5
CCDC170-202ENST00000537358 U2AF1L4Q8WU68 220 aaKnown RBP11.93□□□□□ -0.5
CCDC170-202ENST00000537358 FEZ1Q99689 392 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 CWC22Q9HCG8 908 aaKnown RBP11.93□□□□□ -0.5
CCDC170-202ENST00000537358 IL1RAPL2Q9NP60 686 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 CABP5Q9NP86 173 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 SERPINB13Q9UIV8 391 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
CCDC170-202ENST00000537358 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 APBB1O00213 710 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 RAB11FIP3O75154 756 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 FARP2O94887 1054 aaPredicted RBP11.92□□□□□ -0.5
CCDC170-202ENST00000537358 SGPL1O95470 568 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 TFRCP02786 760 aaKnown RBP11.92□□□□□ -0.5
CCDC170-202ENST00000537358 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
CCDC170-202ENST00000537358 HOXA7P31268 230 aaPredicted RBP11.92□□□□□ -0.5
CCDC170-202ENST00000537358 PDE3AQ14432 1141 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 RRP1BQ14684 758 aaKnown RBP11.92□□□□□ -0.5
CCDC170-202ENST00000537358 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 GPRC5AQ8NFJ5 357 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 SHISA4Q96DD7 197 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 CRNKL1Q9BZJ0 848 aaKnown RBP11.92□□□□□ -0.5
CCDC170-202ENST00000537358 BCL11AQ9H165 835 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 EHD4Q9H223 541 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 NR2E3Q9Y5X4 410 aa11.92□□□□□ -0.5
CCDC170-202ENST00000537358 NAV1Q8NEY1 1877 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 GH2P01242 217 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 HMGCRP04035 888 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 USP14P54578 494 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 HERVK_113P62684 666 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 RAB3GAP1Q15042 981 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 CERKLQ49MI3 558 aaPredicted RBP11.91□□□□□ -0.5
CCDC170-202ENST00000537358 SLC9C2Q5TAH2 1124 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC170-202ENST00000537358 DNAJC2Q99543 621 aaKnown RBP11.91□□□□□ -0.5
CCDC170-202ENST00000537358 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 MORF4L1Q9UBU8 362 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 NDUFB9Q9Y6M9 179 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 CEP290O15078 2479 aa11.91□□□□□ -0.5
CCDC170-202ENST00000537358 MYH8P13535 1937 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 MAPK4P31152 587 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 TRMT44Q8IYL2 757 aaKnown RBP11.9□□□□□ -0.5
CCDC170-202ENST00000537358 SOCS4Q8WXH5 440 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 DEFB118Q96PH6 123 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 P2RX7Q99572 595 aaKnown RBP11.9□□□□□ -0.5
CCDC170-202ENST00000537358 NUDT12Q9BQG2 462 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC170-202ENST00000537358 RCAN3Q9UKA8 241 aa11.9□□□□□ -0.5
CCDC170-202ENST00000537358 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms