RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PPANQ9NQ55 473 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 NLRP2Q9NX02 1062 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 PHF8Q9UPP1 1060 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 CTNND2Q9UQB3 1225 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 SEMA3EO15041 775 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 ZC3H6P61129 1189 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 ST5P78524 1137 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 ATP11AP98196 1134 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 PREPLQ4J6C6 727 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 SLF1Q9BQI6 1058 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 IFIT3O14879 490 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 LIN7AO14910 233 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 JAK2O60674 1132 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 VIMP08670 466 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 SOGA3Q5TF21 947 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 TRIM68Q6AZZ1 485 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CROCCP2Q86T23 111 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 SMARCC2Q8TAQ2 1214 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 MIEF2Q96C03 454 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC42Q96M95 316 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 POLR3EQ9NVU0 708 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 A0A1W2PP64 1363 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 IFT172Q9UG01 1749 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 KIAA0753Q2KHM9 967 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 FAM114A1Q8IWE2 563 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 MLKLQ8NB16 471 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 JAKMIP2Q96AA8 810 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ZCCHC17Q9NP64 241 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 RTEL1Q9NZ71 1219 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CEP126Q9P2H0 1117 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ADGRB1O14514 1584 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 NPATQ14207 1427 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 SLC27A2O14975 620 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ANXA1P04083 346 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 GPTP24298 496 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 RNASE9P60153 205 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 SEPT2Q15019 361 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ZNF772Q68DY9 489 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 FNBP4Q8N3X1 1017 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 USHBP1Q8N6Y0 703 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 NCOA7Q8NI08 942 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 FAM212AQ96EL1 285 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ATP6V0A4Q9HBG4 840 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CAMSAP1Q5T5Y3 1602 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ABLIM1O14639 778 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CUTAO60888 179 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 HOXB7P09629 217 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 NNTQ13423 1086 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ME3Q16798 604 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 C11orf91Q3C1V1 193 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 C6orf163Q5TEZ5 329 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 CYP26C1Q6V0L0 522 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 UBE3BQ7Z3V4 1068 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 PSMB7Q99436 277 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 MAP3K2Q9Y2U5 619 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ERBB3P21860 1342 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 MEFVO15553 781 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 NCOA5Q9HCD5 579 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 HECW2Q9P2P5 1572 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ERCC5P28715 1186 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 TMEM67Q5HYA8 995 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 COG1Q8WTW3 980 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 BMP2KQ9NSY1 1161 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 HNRNPH1P31943 449 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 SEMA3FQ13275 785 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 VPS36Q86VN1 386 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 ITFG2Q969R8 447 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 SEC62Q99442 399 aaKnown RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 EPC1Q9H2F5 836 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 HAUS4Q9H6D7 363 aa6.03□□□□□ -1.44
PTPRD-213ENST00000537002 KDM6AO15550 1401 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-213ENST00000537002 A0A1W2PRG0 241 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 ANO9A1A5B4 782 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 PNOCQ13519 176 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 VPS16Q9H269 839 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 RMND1Q9NWS8 449 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 RNF14Q9UBS8 474 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 LUC7L2Q9Y383 392 aaKnown RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 TRIM65Q6PJ69 517 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 IQCA1Q86XH1 822 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 PHACTR3Q96KR7 559 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 SUDS3Q9H7L9 328 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 KCNK9Q9NPC2 374 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 FAM184BQ9ULE4 1060 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 TPX2Q9ULW0 747 aaKnown RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 ITSN1Q15811 1721 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 PI4KAP2A4QPH2 592 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 EIF3HO15372 352 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 RXRAP19793 462 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 NLRP5P59047 1200 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 CRELD2Q6UXH1 353 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 DHX40Q8IX18 779 aaKnown RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 PI4KAP1Q8N8J0 262 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 UBA5Q9GZZ9 404 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 TAOK3Q9H2K8 898 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 SWAP70Q9UH65 585 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 PRC1O43663 620 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms