RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TMEM87BQ96K49 555 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 DPH2Q9BQC3 489 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-208ENST00000536710 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 FBRSQ9HAH7 460 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 TJP2Q9UDY2 1190 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 CNTNAP5Q8WYK1 1306 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 B2RBV5 119 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 F8W735 103 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-208ENST00000536710 GJB6O95452 261 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 ZYXQ15942 572 aaKnown RBP7.97□□□□□ -1.13
PRKDC-208ENST00000536710 CDCP2Q5VXM1 449 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 SDE2Q6IQ49 451 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 UNC5AQ6ZN44 842 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 KCT2Q8NC54 265 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 SLC9A7Q96T83 725 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 TBX22Q9Y458 520 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 ACTL7BQ9Y614 415 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 MRPL42Q9Y6G3 142 aaKnown RBP7.97□□□□□ -1.13
PRKDC-208ENST00000536710 CADPSQ9ULU8 1353 aa7.97□□□□□ -1.13
PRKDC-208ENST00000536710 PDPK1O15530 556 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
PRKDC-208ENST00000536710 NEFMP07197 916 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 ACRP10323 421 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 GLB1P16278 677 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 RAB6AP20340 208 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 POLR2BP30876 1174 aaKnown RBP7.96□□□□□ -1.14
PRKDC-208ENST00000536710 USP11P51784 963 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 NKG7Q16617 165 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
PRKDC-208ENST00000536710 SLC6A19Q695T7 634 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 LRP10Q7Z4F1 713 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 FAM178BQ8IXR5 827 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 TAB3Q8N5C8 712 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-208ENST00000536710 ISL2Q96A47 359 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 CCDC113Q9H0I3 377 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 AKTIPQ9H8T0 292 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 FAM105AQ9NUU6 356 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 PCDHB10Q9UN67 800 aa7.96□□□□□ -1.14
PRKDC-208ENST00000536710 TNFRSF10CO14798 259 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 TIAF1O95411 115 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 SPATA31C1P0DKV0 1188 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 GBP1P32455 592 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 NTF4P34130 210 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 CHMP4BP1P59074 171 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRKDC-208ENST00000536710 MRPL41Q8IXM3 137 aaKnown RBP7.95□□□□□ -1.14
PRKDC-208ENST00000536710 SLFN12Q8IYM2 578 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 SMYD4Q8IYR2 804 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-208ENST00000536710 TMEM130Q8N3G9 435 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 C2CD4AQ8NCU7 369 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-208ENST00000536710 XAGE3Q8WTP9 111 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 DNAJC7Q99615 494 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 KIF2CQ99661 725 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 MSRB2Q9Y3D2 182 aa7.95□□□□□ -1.14
PRKDC-208ENST00000536710 APBA3O96018 575 aa7.94□□□□□ -1.14
PRKDC-208ENST00000536710 MTERF2Q49AM1 385 aa7.94□□□□□ -1.14
PRKDC-208ENST00000536710 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-208ENST00000536710 PRAMEF13Q5VWM6 474 aa7.94□□□□□ -1.14
PRKDC-208ENST00000536710 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
PRKDC-208ENST00000536710 CEP41Q9BYV8 373 aa7.94□□□□□ -1.14
PRKDC-208ENST00000536710 PHAXQ9H814 394 aaKnown RBP7.94□□□□□ -1.14
PRKDC-208ENST00000536710 LTBP3Q9NS15 1303 aa7.94□□□□□ -1.14
PRKDC-208ENST00000536710 PREPP48147 710 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 RASGRF1Q13972 1273 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 GNPTABQ3T906 1256 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 NLGN1Q8N2Q7 840 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 CCDC74BQ96LY2 380 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 NACC1Q96RE7 527 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 FAM86C1Q9NVL1 165 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 DAGLAQ9Y4D2 1042 aa7.93□□□□□ -1.14
PRKDC-208ENST00000536710 WIPF1O43516 503 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 SLC7A5Q01650 507 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 NRG1Q02297 640 aaPredicted RBP7.92□□□□□ -1.14
PRKDC-208ENST00000536710 SLBPQ14493 270 aaKnown RBP eCLIP7.92□□□□□ -1.14
PRKDC-208ENST00000536710 NCAPHQ15003 741 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 KIAA1211LQ6NV74 962 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 BAHD1Q8TBE0 780 aaPredicted RBP7.92□□□□□ -1.14
PRKDC-208ENST00000536710 LENG1Q96BZ8 264 aaPredicted RBP7.92□□□□□ -1.14
PRKDC-208ENST00000536710 DHRS1Q96LJ7 313 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 FOXQ1Q9C009 403 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 PFDN2Q9UHV9 154 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 PCOLCE2Q9UKZ9 415 aa7.92□□□□□ -1.14
PRKDC-208ENST00000536710 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-208ENST00000536710 C9orf172C9J069 976 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 RGS13O14921 159 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 CLSTN1O94985 981 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 CST3P01034 146 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-208ENST00000536710 RXRBP28702 533 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 CCNFP41002 786 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 IREB2P48200 963 aaKnown RBP7.91□□□□□ -1.14
PRKDC-208ENST00000536710 ARMCX6Q7L4S7 300 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 EEPD1Q7L9B9 569 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 SCARF2Q96GP6 870 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-208ENST00000536710 RNPC3Q96LT9 517 aaKnown RBP7.91□□□□□ -1.14
PRKDC-208ENST00000536710 SLC6A18Q96N87 628 aa7.91□□□□□ -1.14
PRKDC-208ENST00000536710 YIPF2Q9BWQ6 316 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 309.6 ms