RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 NR2E3Q9Y5X4 410 aa15.15■□□□□ 0.02
PRKDC-207ENST00000536483 DOCK3Q8IZD9 2030 aa15.15■□□□□ 0.02
PRKDC-207ENST00000536483 GCLCP48506 637 aaPredicted RBP15.14■□□□□ 0.01
PRKDC-207ENST00000536483 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRKDC-207ENST00000536483 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
PRKDC-207ENST00000536483 TBC1D2Q9BYX2 928 aa15.14■□□□□ 0.01
PRKDC-207ENST00000536483 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
PRKDC-207ENST00000536483 PAK6Q9NQU5 681 aaPredicted RBP15.14■□□□□ 0.01
PRKDC-207ENST00000536483 PI4KBQ9UBF8 816 aa15.14■□□□□ 0.01
PRKDC-207ENST00000536483 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
PRKDC-207ENST00000536483 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
PRKDC-207ENST00000536483 ATP5JP18859 108 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
PRKDC-207ENST00000536483 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 ADGRA1Q86SQ6 560 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
PRKDC-207ENST00000536483 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 DHX36Q9H2U1 1008 aaKnown RBP15.13■□□□□ 0.01
PRKDC-207ENST00000536483 PRO3102Q9H379 93 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 LAMA3Q16787 3333 aa15.13■□□□□ 0.01
PRKDC-207ENST00000536483 EVI5O60447 810 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 CAPN2P17655 700 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 JAG1P78504 1218 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 AAMPQ13685 434 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 PAWRQ96IZ0 340 aaKnown RBP15.12■□□□□ 0.01
PRKDC-207ENST00000536483 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRKDC-207ENST00000536483 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 GJD2Q9UKL4 321 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 PCDHB15Q9Y5E8 787 aa15.12■□□□□ 0.01
PRKDC-207ENST00000536483 BACE1P56817 501 aa15.11■□□□□ 0.01
PRKDC-207ENST00000536483 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
PRKDC-207ENST00000536483 MTMR2Q13614 643 aa15.11■□□□□ 0.01
PRKDC-207ENST00000536483 WDR18Q9BV38 432 aa15.11■□□□□ 0.01
PRKDC-207ENST00000536483 DNAJC18Q9H819 358 aa15.11■□□□□ 0.01
PRKDC-207ENST00000536483 LOC285556D6RIA3 1793 aa15.11■□□□□ 0.01
PRKDC-207ENST00000536483 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 HMGCRP04035 888 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 ASNSP08243 561 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
PRKDC-207ENST00000536483 TRIM32Q13049 653 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
PRKDC-207ENST00000536483 FOXP4Q8IVH2 680 aaPredicted RBP15.1■□□□□ 0.01
PRKDC-207ENST00000536483 DIS3LQ8TF46 1054 aaKnown RBP15.1■□□□□ 0.01
PRKDC-207ENST00000536483 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
PRKDC-207ENST00000536483 HAUS7Q99871 368 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 TMOD4Q9NZQ9 345 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 MORF4L1Q9UBU8 362 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 MAST2Q6P0Q8 1798 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 FLT1P17948 1338 aa15.1■□□□□ 0.01
PRKDC-207ENST00000536483 PEX10O60683 326 aa15.09■□□□□ 0.01
PRKDC-207ENST00000536483 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
PRKDC-207ENST00000536483 GDF11O95390 407 aa15.09■□□□□ 0.01
PRKDC-207ENST00000536483 CYP7A1P22680 504 aa15.09■□□□□ 0.01
PRKDC-207ENST00000536483 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
PRKDC-207ENST00000536483 NECAB2Q7Z6G3 386 aa15.09■□□□□ 0.01
PRKDC-207ENST00000536483 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
PRKDC-207ENST00000536483 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
PRKDC-207ENST00000536483 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
PRKDC-207ENST00000536483 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
PRKDC-207ENST00000536483 SIPA1L1O43166 1804 aa15.08■□□□□ 0.01
PRKDC-207ENST00000536483 TCRBV5S4A2TA0A5A2 114 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 CYP2B6P20813 491 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 DYNLL1P63167 89 aaKnown RBP15.08■□□□□ 0
PRKDC-207ENST00000536483 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 TXNRD2Q9NNW7 524 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 HMX1Q9NP08 348 aaPredicted RBP15.08■□□□□ 0
PRKDC-207ENST00000536483 STAP2Q9UGK3 403 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 RPTORQ8N122 1335 aa15.08■□□□□ 0
PRKDC-207ENST00000536483 C19orf81C9J6K1 198 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 USP17L10C9JJH3 530 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 APBB1O00213 710 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 HERVK_113P62684 666 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 ANKLE1Q8NAG6 615 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 GPRC5AQ8NFJ5 357 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 TRIB2Q92519 343 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 GINM1Q9NU53 330 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 ZBTB21Q9ULJ3 1066 aa15.07■□□□□ 0
PRKDC-207ENST00000536483 HLA-DOAP06340 250 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 PDE6AP16499 860 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 HDAC1Q13547 482 aaPredicted RBP15.06■□□□□ 0
PRKDC-207ENST00000536483 Q3C1V9 767 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 SLC9C2Q5TAH2 1124 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
PRKDC-207ENST00000536483 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 ECHDC1Q9NTX5 307 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 PAG1Q9NWQ8 432 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 RBPJLQ9UBG7 517 aa15.06■□□□□ 0
PRKDC-207ENST00000536483 A0A1W2PPC1 479 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 GOLIM4O00461 696 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 SMARCA5O60264 1052 aaPredicted RBP15.05■□□□□ -0
PRKDC-207ENST00000536483 MNX1P50219 401 aaPredicted RBP15.05■□□□□ -0
PRKDC-207ENST00000536483 C7orf61Q8IZ16 206 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 MIGA1Q8NAN2 632 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 CRBNQ96SW2 442 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms