RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 IQCB1Q15051 598 aa24.64■■□□□ 1.54
TRIM3-214ENST00000536344 BICD2Q8TD16 824 aa24.64■■□□□ 1.54
TRIM3-214ENST00000536344 LEO1Q8WVC0 666 aaPredicted RBP24.64■■□□□ 1.53
TRIM3-214ENST00000536344 TMX1Q9H3N1 280 aa24.64■■□□□ 1.53
TRIM3-214ENST00000536344 LY9Q9HBG7 655 aa24.64■■□□□ 1.53
TRIM3-214ENST00000536344 PLSCR1O15162 318 aa24.63■■□□□ 1.53
TRIM3-214ENST00000536344 APOA5Q6Q788 366 aa24.63■■□□□ 1.53
TRIM3-214ENST00000536344 RBM43Q6ZSC3 357 aaKnown RBP24.63■■□□□ 1.53
TRIM3-214ENST00000536344 ERCC4Q92889 916 aaPredicted RBP24.63■■□□□ 1.53
TRIM3-214ENST00000536344 GGA1Q9UJY5 639 aa24.63■■□□□ 1.53
TRIM3-214ENST00000536344 METAP2P50579 478 aaKnown RBP eCLIP24.63■■□□□ 1.53
TRIM3-214ENST00000536344 ORC3Q9UBD5 711 aaPredicted RBP24.63■■□□□ 1.53
TRIM3-214ENST00000536344 LEMD3Q9Y2U8 911 aa24.63■■□□□ 1.53
TRIM3-214ENST00000536344 EZH2Q15910 746 aaKnown RBP24.63■■□□□ 1.53
TRIM3-214ENST00000536344 SYT10Q6XYQ8 523 aa24.63■■□□□ 1.53
TRIM3-214ENST00000536344 LLPHQ9BRT6 129 aaKnown RBP24.63■■□□□ 1.53
TRIM3-214ENST00000536344 CHD4Q14839 1912 aa24.62■■□□□ 1.53
TRIM3-214ENST00000536344 GOLGA6L19H0YKK7 550 aa24.62■■□□□ 1.53
TRIM3-214ENST00000536344 RANBP6O60518 1105 aaKnown RBP24.62■■□□□ 1.53
TRIM3-214ENST00000536344 SEC31AO94979 1220 aaKnown RBP24.62■■□□□ 1.53
TRIM3-214ENST00000536344 RESTQ13127 1097 aa24.62■■□□□ 1.53
TRIM3-214ENST00000536344 ARHGAP29Q52LW3 1261 aa24.62■■□□□ 1.53
TRIM3-214ENST00000536344 PDGFDQ9GZP0 370 aaPredicted RBP24.62■■□□□ 1.53
TRIM3-214ENST00000536344 SALL1Q9NSC2 1324 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 TRIM66O15016 1216 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 LDHBP07195 334 aaKnown RBP24.61■■□□□ 1.53
TRIM3-214ENST00000536344 EVCP57679 992 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 DDX19AQ9NUU7 478 aaKnown RBP24.61■■□□□ 1.53
TRIM3-214ENST00000536344 LCMT1Q9UIC8 334 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 ELP1O95163 1332 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 SEMA3EO15041 775 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 ZNF804AQ7Z570 1209 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 TBC1D16Q8TBP0 767 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 EPC1Q9H2F5 836 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 CD209Q9NNX6 404 aa24.61■■□□□ 1.53
TRIM3-214ENST00000536344 CTR9Q6PD62 1173 aa24.6■■□□□ 1.53
TRIM3-214ENST00000536344 KLHL34Q8N239 644 aa24.6■■□□□ 1.53
TRIM3-214ENST00000536344 NUP133Q8WUM0 1156 aa24.6■■□□□ 1.53
TRIM3-214ENST00000536344 ZNF622Q969S3 477 aaKnown RBP eCLIP24.6■■□□□ 1.53
TRIM3-214ENST00000536344 MYH2Q9UKX2 1941 aa24.6■■□□□ 1.53
TRIM3-214ENST00000536344 POLR3DP05423 398 aaPredicted RBP24.6■■□□□ 1.53
TRIM3-214ENST00000536344 NLGN1Q8N2Q7 840 aa24.6■■□□□ 1.53
TRIM3-214ENST00000536344 STAG1Q8WVM7 1258 aa24.6■■□□□ 1.53
TRIM3-214ENST00000536344 F8W031 263 aaPredicted RBP24.59■■□□□ 1.53
TRIM3-214ENST00000536344 ZBTB43O43298 467 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 NMT2O60551 498 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 USP17L8P0C7I0 530 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 CDC25BP30305 580 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 SMARCE1Q969G3 411 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 PPEF1O14829 653 aaPredicted RBP24.59■■□□□ 1.53
TRIM3-214ENST00000536344 FAM47AQ5JRC9 791 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 MXD3Q9BW11 206 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 DCP1AQ9NPI6 582 aaPredicted RBP24.59■■□□□ 1.53
TRIM3-214ENST00000536344 SLC12A7Q9Y666 1083 aa24.59■■□□□ 1.53
TRIM3-214ENST00000536344 GOLGA8AA7E2F4 631 aa24.58■■□□□ 1.53
TRIM3-214ENST00000536344 E4F1Q66K89 784 aaPredicted RBP24.58■■□□□ 1.53
TRIM3-214ENST00000536344 KRBA2Q6ZNG9 492 aa24.58■■□□□ 1.53
TRIM3-214ENST00000536344 FBXL16Q8N461 479 aa24.58■■□□□ 1.53
TRIM3-214ENST00000536344 SH3RF3Q8TEJ3 882 aaPredicted RBP24.58■■□□□ 1.53
TRIM3-214ENST00000536344 RSPH14Q9UHP6 348 aa24.58■■□□□ 1.53
TRIM3-214ENST00000536344 SNW1Q13573 536 aaKnown RBP24.58■■□□□ 1.53
TRIM3-214ENST00000536344 KRT23Q9C075 422 aa24.58■■□□□ 1.53
TRIM3-214ENST00000536344 BBOX1O75936 387 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 DOK7Q18PE1 504 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 MCM9Q9NXL9 1143 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 PARP3Q9Y6F1 533 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 BAZ2BQ9UIF8 2168 aaKnown RBP24.57■■□□□ 1.52
TRIM3-214ENST00000536344 GYS2P54840 703 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 MRFAP1L1Q96HT8 127 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 C8orf76Q96K31 380 aa24.57■■□□□ 1.52
TRIM3-214ENST00000536344 SRGNP10124 158 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 WTAPQ15007 396 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 TMEM87BQ96K49 555 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 CNNM2Q9H8M5 875 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 ZMYM6O95789 1325 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 ILDR1Q86SU0 546 aaPredicted RBP24.56■■□□□ 1.52
TRIM3-214ENST00000536344 C10orf67Q8IYJ2 551 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 UBAC1Q9BSL1 405 aa24.56■■□□□ 1.52
TRIM3-214ENST00000536344 CRNKL1Q9BZJ0 848 aaKnown RBP24.56■■□□□ 1.52
TRIM3-214ENST00000536344 SCAND2PQ9GZW5 306 aaPredicted RBP24.56■■□□□ 1.52
TRIM3-214ENST00000536344 FAM217BQ9NTX9 383 aaPredicted RBP24.56■■□□□ 1.52
TRIM3-214ENST00000536344 SAP30BPQ9UHR5 308 aaKnown RBP24.56■■□□□ 1.52
TRIM3-214ENST00000536344 HOXA10P31260 410 aaPredicted RBP24.55■■□□□ 1.52
TRIM3-214ENST00000536344 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
TRIM3-214ENST00000536344 L2HGDHQ9H9P8 463 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 hCG_1642624A0A1W2PR95 340 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 GTF2IP78347 998 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 MFSD14BQ5SR56 506 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 DYNLL2Q96FJ2 89 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 BRIP1Q9BX63 1249 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 TNKSO95271 1327 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 DHX16O60231 1041 aaKnown RBP24.55■■□□□ 1.52
TRIM3-214ENST00000536344 ATP2B4P23634 1241 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 SARM1Q6SZW1 724 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 WDR66Q8TBY9 1149 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 TGFBRAP1Q8WUH2 860 aa24.55■■□□□ 1.52
TRIM3-214ENST00000536344 ZRANB2O95218 330 aaKnown RBP eCLIP24.54■■□□□ 1.52
TRIM3-214ENST00000536344 USP5P45974 858 aa24.54■■□□□ 1.52
TRIM3-214ENST00000536344 CCDC93Q567U6 631 aa24.54■■□□□ 1.52
TRIM3-214ENST00000536344 PPP1R13BQ96KQ4 1090 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms