RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
CDCA3-206ENST00000536241 Q6ZUG5 572 aa13.59□□□□□ -0.23
CDCA3-206ENST00000536241 CDC37L1Q7L3B6 337 aa13.59□□□□□ -0.23
CDCA3-206ENST00000536241 TTC14Q96N46 770 aa13.59□□□□□ -0.23
CDCA3-206ENST00000536241 GPHNQ9NQX3 736 aaPredicted RBP13.59□□□□□ -0.23
CDCA3-206ENST00000536241 PPP2R3BQ9Y5P8 575 aa13.59□□□□□ -0.23
CDCA3-206ENST00000536241 CD2BP2O95400 341 aaKnown RBP13.58□□□□□ -0.24
CDCA3-206ENST00000536241 TSPY3P0CV98 308 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 TSPY8P0CW00 308 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 AK2P54819 239 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 RRP1BQ14684 758 aaKnown RBP13.58□□□□□ -0.24
CDCA3-206ENST00000536241 SUPT20HL1Q3ZLR7 823 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 IGDCC4Q8TDY8 1250 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 FZD1Q9UP38 647 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 LAMB1P07942 1786 aa13.58□□□□□ -0.24
CDCA3-206ENST00000536241 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
CDCA3-206ENST00000536241 ST18O60284 1047 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 NMT2O60551 498 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 AKR1B1P15121 316 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 FGD1P98174 961 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
CDCA3-206ENST00000536241 LDHDQ86WU2 507 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 NEDD1Q8NHV4 660 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 CCDC17Q96LX7 622 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-206ENST00000536241 GPBP1L1Q9HC44 474 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-206ENST00000536241 IL17RBQ9NRM6 502 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
CDCA3-206ENST00000536241 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
CDCA3-206ENST00000536241 GDF11O95390 407 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 JAG1P78504 1218 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 PRKG1Q13976 671 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 TOB2Q14106 344 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-206ENST00000536241 SHROOM1Q2M3G4 852 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-206ENST00000536241 IQCA1Q86XH1 822 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 HOOK2Q96ED9 719 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 TMEM87BQ96K49 555 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-206ENST00000536241 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDCA3-206ENST00000536241 WDR19Q8NEZ3 1342 aa13.56□□□□□ -0.24
CDCA3-206ENST00000536241 PHF20L1A8MW92 1017 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 USP2O75604 605 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-206ENST00000536241 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
CDCA3-206ENST00000536241 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDCA3-206ENST00000536241 ABCB5Q2M3G0 1257 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 TMEM67Q5HYA8 995 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 DCAF15Q66K64 600 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 BRF1Q92994 677 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 CDCA5Q96FF9 252 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 AGXT2Q9BYV1 514 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 TCP11L1Q9NUJ3 509 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 ERICH2A1L162 156 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 TRAF5O00463 557 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-206ENST00000536241 CAP2P40123 477 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 NT5C2P49902 561 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
CDCA3-206ENST00000536241 SEC23AQ15436 765 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 FBXL16Q8N461 479 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 SNX21Q969T3 373 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 MTA3Q9BTC8 594 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 ZNF341Q9BYN7 854 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 CABP5Q9NP86 173 aa13.55□□□□□ -0.24
CDCA3-206ENST00000536241 TNKSO95271 1327 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 GH2P01242 217 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 INPP5BP32019 993 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 WTAPQ15007 396 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 SEPT2Q15019 361 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 ANKRD1Q15327 319 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-206ENST00000536241 CEP95Q96GE4 821 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 ZNF112Q9UJU3 913 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
CDCA3-206ENST00000536241 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
CDCA3-206ENST00000536241 IGKV6D-41A0A0C4DH26 115 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 PPP1R12BO60237 982 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-206ENST00000536241 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
CDCA3-206ENST00000536241 NF2P35240 595 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 LIFRP42702 1097 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 RCSD1Q6JBY9 416 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 DGKHQ86XP1 1220 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 CLEC10AQ8IUN9 316 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 TMTC2Q8N394 836 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 ANKS1AQ92625 1134 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 TPCN1Q9ULQ1 816 aa13.53□□□□□ -0.24
CDCA3-206ENST00000536241 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms