RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PALD1Q9ULE6 856 aa15.96■□□□□ 0.15
RTN3-207ENST00000536011 CDK5RAP2Q96SN8 1893 aa15.96■□□□□ 0.15
RTN3-207ENST00000536011 IFIT2P09913 472 aaKnown RBP15.95■□□□□ 0.14
RTN3-207ENST00000536011 IRX3P78415 501 aaPredicted RBP15.95■□□□□ 0.14
RTN3-207ENST00000536011 ANKRD13CQ8N6S4 541 aa15.95■□□□□ 0.14
RTN3-207ENST00000536011 MIGA1Q8NAN2 632 aa15.95■□□□□ 0.14
RTN3-207ENST00000536011 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
RTN3-207ENST00000536011 SIPA1L1O43166 1804 aa15.95■□□□□ 0.14
RTN3-207ENST00000536011 MYO5AQ9Y4I1 1855 aaKnown RBP15.95■□□□□ 0.14
RTN3-207ENST00000536011 C19orf81C9J6K1 198 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 ADCY3O60266 1144 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 RAB11FIP3O75154 756 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 CAPN2P17655 700 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 BACE1P56817 501 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 DYNLL1P63167 89 aaKnown RBP15.94■□□□□ 0.14
RTN3-207ENST00000536011 IRF5Q13568 498 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 MTMR2Q13614 643 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 TTC6Q86TZ1 520 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 PXYLP1Q8TE99 480 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 EHD4Q9H223 541 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 IL1RAPL2Q9NP60 686 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 RCAN3Q9UKA8 241 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 ZBTB21Q9ULJ3 1066 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 COG6Q9Y2V7 657 aa15.94■□□□□ 0.14
RTN3-207ENST00000536011 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 GJB1P08034 283 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 CCL5P13501 91 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 FLT3LGP49771 235 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 RRP1BQ14684 758 aaKnown RBP15.93■□□□□ 0.14
RTN3-207ENST00000536011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.93■□□□□ 0.14
RTN3-207ENST00000536011 RNF208Q9H0X6 261 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
RTN3-207ENST00000536011 DNAJC18Q9H819 358 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 SERPINB13Q9UIV8 391 aa15.93■□□□□ 0.14
RTN3-207ENST00000536011 APBB1O00213 710 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 GDF11O95390 407 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 GJA8P48165 433 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 MTFR1Q15390 333 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 GTF3C2Q8WUA4 911 aaPredicted RBP15.92■□□□□ 0.14
RTN3-207ENST00000536011 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
RTN3-207ENST00000536011 ANTXR1Q9H6X2 564 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 GABRQQ9UN88 632 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 NDUFB9Q9Y6M9 179 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 MYH1P12882 1939 aa15.92■□□□□ 0.14
RTN3-207ENST00000536011 MAGEB6P1A0A0J9YX57 407 aa15.91■□□□□ 0.14
RTN3-207ENST00000536011 HOXA7P31268 230 aaPredicted RBP15.91■□□□□ 0.14
RTN3-207ENST00000536011 SLC9C2Q5TAH2 1124 aa15.91■□□□□ 0.14
RTN3-207ENST00000536011 FEZ1Q99689 392 aa15.91■□□□□ 0.14
RTN3-207ENST00000536011 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
RTN3-207ENST00000536011 INHAP05111 366 aa15.9■□□□□ 0.14
RTN3-207ENST00000536011 ATXN8OSP0DMR3 200 aa15.9■□□□□ 0.14
RTN3-207ENST00000536011 PDE3AQ14432 1141 aa15.9■□□□□ 0.14
RTN3-207ENST00000536011 TATDN1Q6P1N9 297 aa15.9■□□□□ 0.14
RTN3-207ENST00000536011 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
RTN3-207ENST00000536011 HTATIP2Q9BUP3 242 aa15.9■□□□□ 0.14
RTN3-207ENST00000536011 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
RTN3-207ENST00000536011 GOLIM4O00461 696 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 GH2P01242 217 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
RTN3-207ENST00000536011 ELNP15502 786 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 PDE6AP16499 860 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 USP14P54578 494 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
RTN3-207ENST00000536011 USP17L2Q6R6M4 530 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 RIOK1Q9BRS2 568 aaKnown RBP15.89■□□□□ 0.13
RTN3-207ENST00000536011 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.89■□□□□ 0.13
RTN3-207ENST00000536011 CABP5Q9NP86 173 aa15.89■□□□□ 0.13
RTN3-207ENST00000536011 HERVK_113P62684 666 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 CCAR1Q8IX12 1150 aaKnown RBP15.88■□□□□ 0.13
RTN3-207ENST00000536011 SIRT2Q8IXJ6 389 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 GPRC5AQ8NFJ5 357 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 U2AF1L4Q8WU68 220 aaKnown RBP15.88■□□□□ 0.13
RTN3-207ENST00000536011 SOCS4Q8WXH5 440 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 UNC93B1Q9H1C4 597 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 NAV1Q8NEY1 1877 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
RTN3-207ENST00000536011 HMGCRP04035 888 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 MAPK4P31152 587 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 JAG1P78504 1218 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 RAB3GAP1Q15042 981 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 C12orf42Q96LP6 360 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 BCL11AQ9H165 835 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 PAG1Q9NWQ8 432 aa15.87■□□□□ 0.13
RTN3-207ENST00000536011 DDX60LQ5H9U9 1706 aaKnown RBP15.87■□□□□ 0.13
RTN3-207ENST00000536011 FARP2O94887 1054 aaPredicted RBP15.86■□□□□ 0.13
RTN3-207ENST00000536011 SGPL1O95470 568 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 ATP5JP18859 108 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 AMOTL1Q8IY63 956 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 TRMT44Q8IYL2 757 aaKnown RBP15.86■□□□□ 0.13
RTN3-207ENST00000536011 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
RTN3-207ENST00000536011 LRRCC1Q9C099 1032 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 KIAA1683Q9H0B3 1180 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 CWC22Q9HCG8 908 aaKnown RBP15.86■□□□□ 0.13
RTN3-207ENST00000536011 MCM9Q9NXL9 1143 aa15.86■□□□□ 0.13
RTN3-207ENST00000536011 CEP290O15078 2479 aa15.85■□□□□ 0.13
RTN3-207ENST00000536011 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms