RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 STAP2Q9UGK3 403 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 FPGT-TNNI3KV9GXZ4 949 aa15.87■□□□□ 0.13
TNFRSF1A-207ENST00000535958 SZT2Q5T011 3432 aa15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 IGSF3O75054 1194 aa15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 MAPK4P31152 587 aa15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 RRP1BQ14684 758 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 FEZ1Q99689 392 aa15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 PAGR1Q9BTK6 254 aa15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 ZBTB21Q9ULJ3 1066 aa15.86■□□□□ 0.13
TNFRSF1A-207ENST00000535958 DDX60LQ5H9U9 1706 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 RANBP2P49792 3224 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 PPP4CP60510 307 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 ZKSCAN2Q63HK3 967 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TRIB2Q92519 343 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 P2RX7Q99572 595 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 DBNDD2Q9BQY9 259 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 SAP30BPQ9UHR5 308 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 GJD2Q9UKL4 321 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 PALD1Q9ULE6 856 aa15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 ZMYND8Q9ULU4 1186 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-207ENST00000535958 SIPA1L1O43166 1804 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 FOCADQ5VW36 1801 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 RGS2P41220 211 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 USP5P45974 858 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TRIM32Q13049 653 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 USP17L2Q6R6M4 530 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 ALPK3Q96L96 1907 aa15.84■□□□□ 0.13
TNFRSF1A-207ENST00000535958 CDK5RAP2Q96SN8 1893 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 BCAR3O75815 825 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 IDH1O75874 414 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 GLRX3O76003 335 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CYP2E1P05181 493 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 XRCC5P13010 732 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CYP7A1P22680 504 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ZAP70P43403 619 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ERVK-9P63128 1117 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ERVK-24P63145 666 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CCNA1P78396 465 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 WDR78Q5VTH9 848 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 DNAJC18Q9H819 358 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 TNNQ9UQP3 1299 aa15.83■□□□□ 0.12
TNFRSF1A-207ENST00000535958 SYN1P17600 705 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ZYXQ15942 572 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 GPR142Q7Z601 462 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 PLEKHH3Q7Z736 793 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ADGRA1Q86SQ6 560 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 LRCH3Q96II8 777 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 APBA2Q99767 749 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
TNFRSF1A-207ENST00000535958 SOX1O00570 391 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 PLXNB2O15031 1838 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 GH2P01242 217 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 BMP8BP34820 402 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP14P54578 494 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 DYNLL1P63167 89 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 POLA2Q14181 598 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 RAB3GAP1Q15042 981 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 METTL16Q86W50 562 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ITPRIPQ8IWB1 547 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MIGA1Q8NAN2 632 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 SSH3Q8TE77 659 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CABP5Q9NP86 173 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 IVNS1ABPQ9Y6Y0 642 aa15.81■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MYH1P12882 1939 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L15C9J2P7 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L13C9JLJ4 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L11C9JVI0 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L18D6R9N7 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L22D6RA61 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L17D6RBQ6 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L19D6RCP7 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L20D6RJB6 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ATP8B2P98198 1209 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 USP17L24Q0WX57 530 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MAP3K12Q12852 859 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MAP3K21Q5TCX8 1036 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 TTC6Q86TZ1 520 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MAGEB6Q8N7X4 407 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 GDF15Q99988 308 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 UBE2OQ9C0C9 1292 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 PIH1D3Q9NQM4 214 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 SERPINB13Q9UIV8 391 aa15.8■□□□□ 0.12
TNFRSF1A-207ENST00000535958 PEX10O60683 326 aa15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MAGEA10P43363 369 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 JAG1P78504 1218 aa15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CACNB2Q08289 660 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 SHROOM1Q2M3G4 852 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MFSD14CQ5VZR4 134 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms