RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CABP5Q9NP86 173 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 RASA1P20936 1047 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 SHMT1P34896 483 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 IREB2P48200 963 aaKnown RBP19.15■□□□□ 0.66
VAMP1-205ENST00000535927 MAP1SQ66K74 1059 aaPredicted RBP19.15■□□□□ 0.66
VAMP1-205ENST00000535927 RUFY3Q7L099 469 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 NEDD1Q8NHV4 660 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 DYNLL2Q96FJ2 89 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 GLIS2Q9BZE0 524 aaPredicted RBP19.15■□□□□ 0.66
VAMP1-205ENST00000535927 TOMM22Q9NS69 142 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 SYNPO2Q9UMS6 1093 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 SIPA1L1O43166 1804 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 PLIN4Q96Q06 1357 aa19.15■□□□□ 0.66
VAMP1-205ENST00000535927 TSPY2A6NKD2 308 aa19.14■□□□□ 0.65
VAMP1-205ENST00000535927 ADM5C9JUS6 153 aa19.14■□□□□ 0.65
VAMP1-205ENST00000535927 RANBP6O60518 1105 aaKnown RBP19.14■□□□□ 0.65
VAMP1-205ENST00000535927 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
VAMP1-205ENST00000535927 ASNSP08243 561 aa19.14■□□□□ 0.65
VAMP1-205ENST00000535927 CAP2P40123 477 aa19.14■□□□□ 0.65
VAMP1-205ENST00000535927 TMEM179Q6ZVK1 233 aa19.14■□□□□ 0.65
VAMP1-205ENST00000535927 MB21D2Q8IYB1 491 aaPredicted RBP19.14■□□□□ 0.65
VAMP1-205ENST00000535927 JAKMIP1Q96N16 626 aaKnown RBP19.14■□□□□ 0.65
VAMP1-205ENST00000535927 ZSWIM5Q9P217 1185 aa19.14■□□□□ 0.65
VAMP1-205ENST00000535927 ERICH2A1L162 156 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 PHF20L1A8MW92 1017 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 TSPY3P0CV98 308 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 TSPY8P0CW00 308 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 ANKRD1Q15327 319 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 NOL9Q5SY16 702 aaKnown RBP19.13■□□□□ 0.65
VAMP1-205ENST00000535927 STOX1Q6ZVD7 989 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 DGKHQ86XP1 1220 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 ANKS1AQ92625 1134 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 DNAJC18Q9H819 358 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 KANSL2Q9H9L4 492 aa19.13■□□□□ 0.65
VAMP1-205ENST00000535927 TRPM7Q96QT4 1865 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 B4E1Z4 1266 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 KDM4AO75164 1064 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
VAMP1-205ENST00000535927 MAP3K9P80192 1104 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 TFAP4Q01664 338 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 EXOSC10Q01780 885 aaKnown RBP19.12■□□□□ 0.65
VAMP1-205ENST00000535927 ABCB5Q2M3G0 1257 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 MIGA2Q7L4E1 593 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 C2orf69Q8N8R5 385 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 UBAC1Q9BSL1 405 aa19.12■□□□□ 0.65
VAMP1-205ENST00000535927 NEDD4P46934 1319 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 ST18O60284 1047 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 USP2O75604 605 aaPredicted RBP19.11■□□□□ 0.65
VAMP1-205ENST00000535927 RPS6KB1P23443 525 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 LIFRP42702 1097 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 MCM2P49736 904 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 ADCK5Q3MIX3 580 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 RRP12Q5JTH9 1297 aaKnown RBP19.11■□□□□ 0.65
VAMP1-205ENST00000535927 ANKRD13AQ8IZ07 590 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 CHMP4CQ96CF2 233 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 KIF2CQ99661 725 aa19.11■□□□□ 0.65
VAMP1-205ENST00000535927 NOVP48745 357 aa19.1■□□□□ 0.65
VAMP1-205ENST00000535927 SLC4A8Q2Y0W8 1093 aa19.1■□□□□ 0.65
VAMP1-205ENST00000535927 SLC44A5Q8NCS7 719 aa19.1■□□□□ 0.65
VAMP1-205ENST00000535927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.1■□□□□ 0.65
VAMP1-205ENST00000535927 ZSCAN10Q96SZ4 725 aaPredicted RBP19.1■□□□□ 0.65
VAMP1-205ENST00000535927 AGXT2Q9BYV1 514 aa19.1■□□□□ 0.65
VAMP1-205ENST00000535927 NYAP2Q9P242 653 aa19.1■□□□□ 0.65
VAMP1-205ENST00000535927 PRDM1O75626 825 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 CDAN1Q8IWY9 1227 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 SCYL3Q8IZE3 742 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 MKL1Q969V6 931 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 WRNIP1Q96S55 665 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 SH2D4AQ9H788 454 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 PICK1Q9NRD5 415 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 PDRG1Q9NUG6 133 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 CSADQ9Y600 493 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 TACC3Q9Y6A5 838 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 PAPPA2Q9BXP8 1791 aa19.09■□□□□ 0.65
VAMP1-205ENST00000535927 PASKQ96RG2 1323 aa19.08■□□□□ 0.65
VAMP1-205ENST00000535927 IGKV6D-41A0A0C4DH26 115 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 PRC1O43663 620 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 NEK4P51957 841 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 RCAN1P53805 252 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 LDLRAD1Q5T700 205 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 PRAMEF18Q5VWM3 479 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 AS3MTQ9HBK9 375 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 GBA2Q9HCG7 927 aaPredicted RBP19.08■□□□□ 0.64
VAMP1-205ENST00000535927 INCENPQ9NQS7 918 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 MTMR4Q9NYA4 1195 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 ANGEL1Q9UNK9 670 aaKnown RBP19.08■□□□□ 0.64
VAMP1-205ENST00000535927 SCAF8Q9UPN6 1271 aaKnown RBP19.08■□□□□ 0.64
VAMP1-205ENST00000535927 TAF6LQ9Y6J9 622 aa19.08■□□□□ 0.64
VAMP1-205ENST00000535927 GREB1LQ9C091 1923 aaPredicted RBP19.08■□□□□ 0.64
VAMP1-205ENST00000535927 SSC5DA1L4H1 1573 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 USP17L5A8MUK1 530 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 SMIM22K7EJ46 135 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 IFIT3O14879 490 aaKnown RBP19.07■□□□□ 0.64
VAMP1-205ENST00000535927 TTLL1O95922 423 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 AKR1B1P15121 316 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 FGD1P98174 961 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 EVX2Q03828 476 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms