RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 CAP1Q01518 475 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 RRP1BQ14684 758 aaKnown RBP10.74□□□□□ -0.69
CHD4-204ENST00000535810 OTOP1Q7RTM1 612 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 PRRT2Q7Z6L0 340 aaPredicted RBP10.74□□□□□ -0.69
CHD4-204ENST00000535810 CCDC84Q86UT8 332 aaPredicted RBP10.74□□□□□ -0.69
CHD4-204ENST00000535810 CD99L2Q8TCZ2 262 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 EDC3Q96F86 508 aaKnown RBP10.74□□□□□ -0.69
CHD4-204ENST00000535810 ERO1AQ96HE7 468 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 DNAJC18Q9H819 358 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 HERC5Q9UII4 1024 aaKnown RBP10.74□□□□□ -0.69
CHD4-204ENST00000535810 PALD1Q9ULE6 856 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 AFG3L2Q9Y4W6 797 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 PHIPQ8WWQ0 1821 aa10.74□□□□□ -0.69
CHD4-204ENST00000535810 PDHXO00330 501 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 DLL1O00548 723 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 CAP2P40123 477 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 GPAT2Q6NUI2 795 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 METTL16Q86W50 562 aaKnown RBP10.73□□□□□ -0.69
CHD4-204ENST00000535810 HAUS7Q99871 368 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 RIOK1Q9BRS2 568 aaKnown RBP10.73□□□□□ -0.69
CHD4-204ENST00000535810 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 SAP30BPQ9UHR5 308 aaKnown RBP10.73□□□□□ -0.69
CHD4-204ENST00000535810 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 PTPRFP10586 1907 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 ADGRA2Q96PE1 1338 aa10.73□□□□□ -0.69
CHD4-204ENST00000535810 TCRBV5S4A2TA0A5A2 114 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 TRIM75PA6NK02 468 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
CHD4-204ENST00000535810 SLC4A8Q2Y0W8 1093 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 FASTKD5Q7L8L6 764 aaKnown RBP10.72□□□□□ -0.69
CHD4-204ENST00000535810 PARK7Q99497 189 aaKnown RBP10.72□□□□□ -0.69
CHD4-204ENST00000535810 EFCC1Q9HA90 598 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 PAG1Q9NWQ8 432 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 ZNF532Q9HCE3 1301 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
CHD4-204ENST00000535810 CUL9Q8IWT3 2517 aa10.72□□□□□ -0.69
CHD4-204ENST00000535810 MAGEB6P1A0A0J9YX57 407 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 HLA-DOAP06340 250 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 CYP2C8P10632 490 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 USP5P45974 858 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 LACTBP83111 547 aaPredicted RBP10.71□□□□□ -0.69
CHD4-204ENST00000535810 C17orf99Q6UX52 265 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 FOXP4Q8IVH2 680 aaPredicted RBP10.71□□□□□ -0.69
CHD4-204ENST00000535810 CRACR2BQ8N4Y2 399 aaPredicted RBP10.71□□□□□ -0.69
CHD4-204ENST00000535810 ZNF280CQ8ND82 737 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 CRBNQ96SW2 442 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 TRIM34Q9BYJ4 488 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 ARHGAP39Q9C0H5 1083 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 ECHDC1Q9NTX5 307 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 PTPN22Q9Y2R2 807 aa10.71□□□□□ -0.69
CHD4-204ENST00000535810 RANBP2P49792 3224 aaKnown RBP10.71□□□□□ -0.7
CHD4-204ENST00000535810 CHGBP05060 677 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 ASNSP08243 561 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 ADD2P35612 726 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 JAG1P78504 1218 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 SPP2Q13103 211 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 SHROOM1Q2M3G4 852 aaPredicted RBP10.7□□□□□ -0.7
CHD4-204ENST00000535810 SLFNL1Q499Z3 407 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 TSHZ3Q63HK5 1081 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 GADL1Q6ZQY3 521 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 LCORLQ8N3X6 602 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 TBC1D2Q9BYX2 928 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.7□□□□□ -0.74e-7■■■□□ 16.7
CHD4-204ENST00000535810 EHD4Q9H223 541 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 MYH1P12882 1939 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 ZSWIM8A7E2V4 1837 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
CHD4-204ENST00000535810 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 PPP1R37O75864 691 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 GDF11O95390 407 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 BCRP11274 1271 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 CTGFP29279 349 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 HMGCS2P54868 508 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 TREML2Q5T2D2 321 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
CHD4-204ENST00000535810 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 CRNKL1Q9BZJ0 848 aaKnown RBP10.69□□□□□ -0.7
CHD4-204ENST00000535810 SERPINB13Q9UIV8 391 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 ZBTB21Q9ULJ3 1066 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 AGTPBP1Q9UPW5 1226 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
CHD4-204ENST00000535810 NAV1Q8NEY1 1877 aa10.69□□□□□ -0.7
CHD4-204ENST00000535810 KIAA0100Q14667 2235 aaKnown RBP10.69□□□□□ -0.7
CHD4-204ENST00000535810 MBD4O95243 580 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 PLCD1P51178 756 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 MTMR2Q13614 643 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 ARHGEF6Q15052 776 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 UBE3CQ15386 1083 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 TATDN1Q6P1N9 297 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 TTC6Q86TZ1 520 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 SLC17A8Q8NDX2 589 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 SDR42E1Q8WUS8 393 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 ARMC5Q96C12 935 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms