RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 TRIM34Q9BYJ4 488 aa25.16■■□□□ 1.62
LTBR-205ENST00000535739 GDF11O95390 407 aa25.15■■□□□ 1.62
LTBR-205ENST00000535739 BACE1P56817 501 aa25.15■■□□□ 1.62
LTBR-205ENST00000535739 PANK1Q8TE04 598 aa25.15■■□□□ 1.62
LTBR-205ENST00000535739 EXOC6BQ9Y2D4 811 aa25.15■■□□□ 1.62
LTBR-205ENST00000535739 SGPL1O95470 568 aa25.14■■□□□ 1.62
LTBR-205ENST00000535739 MIGA1Q8NAN2 632 aa25.14■■□□□ 1.62
LTBR-205ENST00000535739 ANTXR1Q9H6X2 564 aa25.14■■□□□ 1.62
LTBR-205ENST00000535739 RANBP2P49792 3224 aaKnown RBP25.14■■□□□ 1.61
LTBR-205ENST00000535739 MAGEB6Q8N7X4 407 aa25.13■■□□□ 1.61
LTBR-205ENST00000535739 TMOD4Q9NZQ9 345 aa25.13■■□□□ 1.61
LTBR-205ENST00000535739 PLXNB2O15031 1838 aa25.13■■□□□ 1.61
LTBR-205ENST00000535739 FARP2O94887 1054 aaPredicted RBP25.12■■□□□ 1.61
LTBR-205ENST00000535739 HLA-DOAP06340 250 aa25.12■■□□□ 1.61
LTBR-205ENST00000535739 FXR1P51114 621 aaKnown RBP eCLIP25.12■■□□□ 1.61
LTBR-205ENST00000535739 IRX3P78415 501 aaPredicted RBP25.12■■□□□ 1.61
LTBR-205ENST00000535739 AACSQ86V21 672 aa25.12■■□□□ 1.61
LTBR-205ENST00000535739 DEFB118Q96PH6 123 aa25.12■■□□□ 1.61
LTBR-205ENST00000535739 ZBTB21Q9ULJ3 1066 aa25.12■■□□□ 1.61
LTBR-205ENST00000535739 USP17L10C9JJH3 530 aa25.11■■□□□ 1.61
LTBR-205ENST00000535739 P2RX7Q99572 595 aaKnown RBP25.11■■□□□ 1.61
LTBR-205ENST00000535739 HTATIP2Q9BUP3 242 aa25.11■■□□□ 1.61
LTBR-205ENST00000535739 MORF4L1Q9UBU8 362 aa25.11■■□□□ 1.61
LTBR-205ENST00000535739 ZBED9Q6R2W3 1325 aa25.11■■□□□ 1.61
LTBR-205ENST00000535739 C19orf81C9J6K1 198 aa25.1■■□□□ 1.61
LTBR-205ENST00000535739 PEX10O60683 326 aa25.1■■□□□ 1.61
LTBR-205ENST00000535739 TFRCP02786 760 aaKnown RBP25.1■■□□□ 1.61
LTBR-205ENST00000535739 HOXA7P31268 230 aaPredicted RBP25.1■■□□□ 1.61
LTBR-205ENST00000535739 USP5P45974 858 aa25.1■■□□□ 1.61
LTBR-205ENST00000535739 ERC1Q8IUD2 1116 aa25.1■■□□□ 1.61
LTBR-205ENST00000535739 PAK6Q9NQU5 681 aaPredicted RBP25.1■■□□□ 1.61
LTBR-205ENST00000535739 GINM1Q9NU53 330 aa25.1■■□□□ 1.61
LTBR-205ENST00000535739 GJD2Q9UKL4 321 aa25.1■■□□□ 1.61
LTBR-205ENST00000535739 CHRDL2Q6WN34 429 aa25.09■■□□□ 1.61
LTBR-205ENST00000535739 IL1RAPL2Q9NP60 686 aa25.09■■□□□ 1.61
LTBR-205ENST00000535739 HERVK_113P62684 666 aa25.08■■□□□ 1.61
LTBR-205ENST00000535739 MAP3K12Q12852 859 aa25.08■■□□□ 1.61
LTBR-205ENST00000535739 TXNRD2Q9NNW7 524 aa25.08■■□□□ 1.61
LTBR-205ENST00000535739 GH2P01242 217 aa25.07■■□□□ 1.6
LTBR-205ENST00000535739 CERS3Q8IU89 383 aa25.07■■□□□ 1.6
LTBR-205ENST00000535739 EMILIN3Q9NT22 766 aa25.07■■□□□ 1.6
LTBR-205ENST00000535739 SZT2Q5T011 3432 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 HMGCRP04035 888 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 TRIM32Q13049 653 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 TATDN1Q6P1N9 297 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 RHPN1Q8TCX5 695 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 CRISPLD2Q9H0B8 497 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.06■■□□□ 1.6
LTBR-205ENST00000535739 ALPK3Q96L96 1907 aa25.06■■□□□ 1.6
LTBR-205ENST00000535739 HSP90AB4PQ58FF6 505 aa25.05■■□□□ 1.6
LTBR-205ENST00000535739 USP17L2Q6R6M4 530 aa25.05■■□□□ 1.6
LTBR-205ENST00000535739 GPRC5AQ8NFJ5 357 aa25.05■■□□□ 1.6
LTBR-205ENST00000535739 RBPJLQ9UBG7 517 aa25.05■■□□□ 1.6
LTBR-205ENST00000535739 SERPINB13Q9UIV8 391 aa25.05■■□□□ 1.6
LTBR-205ENST00000535739 APBB1O00213 710 aa25.04■■□□□ 1.6
LTBR-205ENST00000535739 RIOK1Q9BRS2 568 aaKnown RBP25.04■■□□□ 1.6
LTBR-205ENST00000535739 EHD4Q9H223 541 aa25.04■■□□□ 1.6
LTBR-205ENST00000535739 NR2E3Q9Y5X4 410 aa25.04■■□□□ 1.6
LTBR-205ENST00000535739 NAV1Q8NEY1 1877 aa25.04■■□□□ 1.6
LTBR-205ENST00000535739 CAPN2P17655 700 aa25.03■■□□□ 1.6
LTBR-205ENST00000535739 CYP2B6P20813 491 aa25.03■■□□□ 1.6
LTBR-205ENST00000535739 ZYXQ15942 572 aaKnown RBP25.03■■□□□ 1.6
LTBR-205ENST00000535739 Q3C1V9 767 aa25.03■■□□□ 1.6
LTBR-205ENST00000535739 TMED8Q6PL24 325 aaPredicted RBP25.03■■□□□ 1.6
LTBR-205ENST00000535739 POTEEQ6S8J3 1075 aa25.03■■□□□ 1.6
LTBR-205ENST00000535739 TTC6Q86TZ1 520 aa25.03■■□□□ 1.6
LTBR-205ENST00000535739 TRIB2Q92519 343 aa25.03■■□□□ 1.6
LTBR-205ENST00000535739 PAWRQ96IZ0 340 aaKnown RBP25.03■■□□□ 1.6
LTBR-205ENST00000535739 RBM27Q9P2N5 1060 aaKnown RBP25.03■■□□□ 1.6
LTBR-205ENST00000535739 DDX60LQ5H9U9 1706 aaKnown RBP25.03■■□□□ 1.6
LTBR-205ENST00000535739 CERKLQ49MI3 558 aaPredicted RBP25.02■■□□□ 1.6
LTBR-205ENST00000535739 DIS3LQ8TF46 1054 aaKnown RBP25.02■■□□□ 1.6
LTBR-205ENST00000535739 PAGR1Q9BTK6 254 aa25.02■■□□□ 1.6
LTBR-205ENST00000535739 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
LTBR-205ENST00000535739 RPTORQ8N122 1335 aa25.02■■□□□ 1.6
LTBR-205ENST00000535739 MAGEB6P1A0A0J9YX57 407 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 MS4A1P11836 297 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 PLCD1P51178 756 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 ERVK-9P63128 1117 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 ERVK-24P63145 666 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 RAB3GAP1Q15042 981 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 TTF1Q15361 905 aaPredicted RBP25.01■■□□□ 1.59
LTBR-205ENST00000535739 FEZ1Q99689 392 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 NUDT12Q9BQG2 462 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 PORCNQ9H237 461 aa25.01■■□□□ 1.59
LTBR-205ENST00000535739 HMX1Q9NP08 348 aaPredicted RBP25.01■■□□□ 1.59
LTBR-205ENST00000535739 EVI5O60447 810 aa25■■□□□ 1.59
LTBR-205ENST00000535739 PDE6AP16499 860 aa25■■□□□ 1.59
LTBR-205ENST00000535739 ABCB5Q2M3G0 1257 aa25■■□□□ 1.59
LTBR-205ENST00000535739 SLC9C2Q5TAH2 1124 aa25■■□□□ 1.59
LTBR-205ENST00000535739 SIRT2Q8IXJ6 389 aa25■■□□□ 1.59
LTBR-205ENST00000535739 RPAP2Q8IXW5 612 aaPredicted RBP25■■□□□ 1.59
LTBR-205ENST00000535739 CLASRPQ8N2M8 674 aaKnown RBP25■■□□□ 1.59
LTBR-205ENST00000535739 KIF1BPQ96EK5 621 aa25■■□□□ 1.59
LTBR-205ENST00000535739 C12orf42Q96LP6 360 aa25■■□□□ 1.59
LTBR-205ENST00000535739 COG6Q9Y2V7 657 aa25■■□□□ 1.59
LTBR-205ENST00000535739 POLR3DP05423 398 aaPredicted RBP24.99■■□□□ 1.59
LTBR-205ENST00000535739 MAPK4P31152 587 aa24.99■■□□□ 1.59
LTBR-205ENST00000535739 SHMT1P34896 483 aa24.99■■□□□ 1.59
LTBR-205ENST00000535739 ACER1Q8TDN7 264 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms