RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 BLZF1Q9H2G9 400 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 MYO1CO00159 1063 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 KIF5CO60282 957 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 MBD4O95243 580 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 DPYDQ12882 1025 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 MAGEB6Q8N7X4 407 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 MIGA1Q8NAN2 632 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC4-214ENST00000535493 CCDC102AQ96A19 550 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 EEF2KMTQ96G04 330 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 NAPBQ9H115 298 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 A0A1B0GTH6 734 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 CCDC151A5D8V7 595 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 ENC1O14682 589 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 SHISA4Q96DD7 197 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
HDAC4-214ENST00000535493 VPS16Q9H269 839 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 VPS54Q9P1Q0 977 aa15.25■□□□□ 0.03
HDAC4-214ENST00000535493 HOOK1Q9UJC3 728 aaKnown RBP15.25■□□□□ 0.03
HDAC4-214ENST00000535493 HLFQ16534 295 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 IFNL3Q8IZI9 196 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 RSPH14Q9UHP6 348 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-214ENST00000535493 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 MAP2K7O14733 419 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-214ENST00000535493 GYPCP04921 128 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 PLCD1P51178 756 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 FAM193AP78312 1265 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 TCIRG1Q13488 830 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 SLF1Q9BQI6 1058 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 CDC23Q9UJX2 597 aa15.24■□□□□ 0.03
HDAC4-214ENST00000535493 ZMYND10O75800 440 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 AK7Q96M32 723 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 HDAC6Q9UBN7 1215 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 TNNT3P45378 269 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-214ENST00000535493 RTN1Q16799 776 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 SYNRGQ9UMZ2 1314 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 ERVK-24P63145 666 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 ZNF174Q15697 407 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 NT5DC1Q5TFE4 455 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
HDAC4-214ENST00000535493 ISCA1Q9BUE6 129 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■□□□□ 9.5
HDAC4-214ENST00000535493 ADD3Q9UEY8 706 aaKnown RBP15.23■□□□□ 0.03
HDAC4-214ENST00000535493 CTNND2Q9UQB3 1225 aa15.23■□□□□ 0.03
HDAC4-214ENST00000535493 SRGAP2O75044 1071 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 TRIM22Q8IYM9 498 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 KIF13AQ9H1H9 1805 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 MYO5AQ9Y4I1 1855 aaKnown RBP15.22■□□□□ 0.03
HDAC4-214ENST00000535493 SLIT3O75094 1523 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 C4AP0C0L4 1744 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 C4BP0C0L5 1744 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 CTAGE9A4FU28 777 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 LRRIQ3A6PVS8 624 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-214ENST00000535493 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
HDAC4-214ENST00000535493 MFAP3LO75121 409 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 IFNAR1P17181 557 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 SGMS1Q86VZ5 419 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 RIN2Q8WYP3 895 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-214ENST00000535493 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 CHP1Q99653 195 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
HDAC4-214ENST00000535493 SRPRBQ9Y5M8 271 aaKnown RBP15.22■□□□□ 0.03
HDAC4-214ENST00000535493 KAT6BQ8WYB5 2073 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 MINDY4BA8MYZ0 360 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 TDO2P48775 406 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
HDAC4-214ENST00000535493 WTAPQ15007 396 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 RILPL1Q5EBL4 403 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 MUM1L1Q5H9M0 696 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 DNAJC10Q8IXB1 793 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 PANX2Q96RD6 677 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 NUP88Q99567 741 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-214ENST00000535493 TAB2Q9NYJ8 693 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 DACH1Q9UI36 760 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
HDAC4-214ENST00000535493 TCRBV5S4A2TA0A5A2 114 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 N4BP3O15049 544 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 ACTN2P35609 894 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 BRD3Q15059 726 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.21■□□□□ 0.02
HDAC4-214ENST00000535493 HDXQ7Z353 690 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 CRACR2BQ8N4Y2 399 aaPredicted RBP15.21■□□□□ 0.02
HDAC4-214ENST00000535493 EXOC4Q96A65 974 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 STRN4Q9NRL3 753 aa15.21■□□□□ 0.02
HDAC4-214ENST00000535493 RRP15Q9Y3B9 282 aaKnown RBP15.21■□□□□ 0.02
HDAC4-214ENST00000535493 CASP8Q14790 479 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 AKNAD1Q5T1N1 836 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms