RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 ERVK-9P63128 1117 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 ERVK-24P63145 666 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 TFF2Q03403 129 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 TLE2Q04725 743 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
VAMP1-204ENST00000535180 PBX4Q9BYU1 374 aa13.51□□□□□ -0.25
VAMP1-204ENST00000535180 OSBPL5Q9H0X9 879 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-204ENST00000535180 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 TBC1D12O60347 775 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 CLTBP09497 229 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-204ENST00000535180 PBX2P40425 430 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 FLIIQ13045 1269 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-204ENST00000535180 TRANK1O15050 2925 aa13.5□□□□□ -0.25
VAMP1-204ENST00000535180 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 PDE8BO95263 885 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 RAG1P15918 1043 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 ADCYAP1R1P41586 468 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 CCDC129Q6ZRS4 1044 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 VGLL2Q8N8G2 317 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
VAMP1-204ENST00000535180 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
VAMP1-204ENST00000535180 FAM86C2PA6NEL3 165 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 SMIM22K7EJ46 135 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 PRDX5P30044 214 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 AS3MTQ9HBK9 375 aa13.48□□□□□ -0.25
VAMP1-204ENST00000535180 GRXCR1A8MXD5 290 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 ERC2O15083 957 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 IGHA2P01877 340 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 HOXC6P09630 235 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 CYBAP13498 195 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 CYP2C19P33261 490 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 GTF3C2Q8WUA4 911 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 FERMT2Q96AC1 680 aa13.47□□□□□ -0.25
VAMP1-204ENST00000535180 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 CWC22Q9HCG8 908 aaKnown RBP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
VAMP1-204ENST00000535180 SLC15A5A6NIM6 579 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 GRM8O00222 908 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 IFIT1P09914 478 aaKnown RBP13.46□□□□□ -0.25
VAMP1-204ENST00000535180 CAP2P40123 477 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 BACE1P56817 501 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 LRRC24Q50LG9 513 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 BEND3Q5T5X7 828 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 PAGR1Q9BTK6 254 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 TMOD4Q9NZQ9 345 aa13.46□□□□□ -0.25
VAMP1-204ENST00000535180 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 PI4K2BG5E9Z4 385 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-204ENST00000535180 NHLH1Q02575 133 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 PICALMQ13492 652 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 MTMR2Q13614 643 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 LRRC41Q15345 812 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 HERVK_113Q902F9 699 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 WDR18Q9BV38 432 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
VAMP1-204ENST00000535180 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 GAKO14976 1311 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 PRR33A8MZF0 331 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 C19orf81C9J6K1 198 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 SEPT4O43236 478 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 TLL1O43897 1013 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 FGFR2P21802 821 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 PTPREP23469 700 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 CCNA1P78396 465 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
VAMP1-204ENST00000535180 RAB30Q15771 203 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-204ENST00000535180 ANO1Q5XXA6 986 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 NPLOC4Q8TAT6 608 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 MSRAQ9UJ68 235 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 PHF24Q9UPV7 400 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 CDK5RAP2Q96SN8 1893 aa13.44□□□□□ -0.26
VAMP1-204ENST00000535180 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 GRB14Q14449 540 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
VAMP1-204ENST00000535180 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
VAMP1-204ENST00000535180 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 C16orf59Q7L2K0 433 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 SLC44A5Q8NCS7 719 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 SLC28A3Q9HAS3 691 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-204ENST00000535180 RABGAP1Q9Y3P9 1069 aa13.43□□□□□ -0.26
VAMP1-204ENST00000535180 BRWD1Q9NSI6 2320 aa13.42□□□□□ -0.26
VAMP1-204ENST00000535180 SIPA1L1O43166 1804 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms