RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 COL9A3Q14050 684 aaPredicted RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 SART3Q15020 963 aaKnown RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 IQCB1Q15051 598 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 CLPPQ16740 277 aaPredicted RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 RTN1Q16799 776 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 KIAA0753Q2KHM9 967 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 KBTBD12Q3ZCT8 623 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 CCDC92Q53HC0 331 aaPredicted RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 CCDC70Q6NSX1 233 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 CAPN12Q6ZSI9 719 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 PODNQ7Z5L7 613 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 KIAA1328Q86T90 577 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 ERC1Q8IUD2 1116 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 MYO1HQ8N1T3 1032 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 ZNF397Q8NF99 534 aaPredicted RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 GPT2Q8TD30 523 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 SREK1Q8WXA9 508 aaKnown RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 JAKMIP2Q96AA8 810 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 RSRC1Q96IZ7 334 aaKnown RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 NEUROD4Q9HD90 331 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 DKK3Q9UBP4 350 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 PRR12Q9ULL5 1215 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 RABL2BQ9UNT1 228 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 WDR37Q9Y2I8 494 aa6□□□□□ -1.45
SNHG1-201ENST00000535076 EIF4G1Q04637 1599 aaKnown RBP6□□□□□ -1.45
SNHG1-201ENST00000535076 KTN1Q86UP2 1357 aaKnown RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 PABPN1LA6NDY0 278 aaKnown RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 GOLGA6L19H0YKK7 550 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 KIF2AO00139 706 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 OPA1O60313 960 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 VAMP4O75379 141 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 MTRF1O75570 445 aaKnown RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 NEBLO76041 1014 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 RTN3O95197 1032 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 U2AF1L5P0DN76 240 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 TPP2P29144 1249 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 MAN1A1P33908 653 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 CORO7P57737 925 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 U2AF1Q01081 240 aaKnown RBP eCLIP5.99□□□□□ -1.458e-8■■■■□ 21.6
SNHG1-201ENST00000535076 G3BP1Q13283 466 aaKnown RBP eCLIP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 SLC4A8Q2Y0W8 1093 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 PREPLQ4J6C6 727 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 FAM26DQ5JW98 314 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 SFMBT2Q5VUG0 894 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 NUTM2GQ5VZR2 741 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 SPATA21Q7Z572 469 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 C11orf96Q7Z7L8 435 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 ARHGEF25Q86VW2 580 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 DRC7Q8IY82 874 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 ERMNQ8TAM6 284 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 FAM200AQ8TCP9 573 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 NEK9Q8TD19 979 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 ZBTB10Q96DT7 871 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 TRIM11Q96F44 468 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 THOC1Q96FV9 657 aaKnown RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 DHTKD1Q96HY7 919 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 DHRS1Q96LJ7 313 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 FAM81BQ96LP2 452 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 MPHOSPH6Q99547 160 aaKnown RBP5.99□□□□□ -1.45
SNHG1-201ENST00000535076 TMX1Q9H3N1 280 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 NRDE2Q9H7Z3 1164 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 ACAD8Q9UKU7 415 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 LRFN2Q9ULH4 789 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 KCNH4Q9UQ05 1017 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 CHMP3Q9Y3E7 222 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 ATP6V0A2Q9Y487 856 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 IKBKGQ9Y6K9 419 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 YEATS2Q9ULM3 1422 aa5.99□□□□□ -1.45
SNHG1-201ENST00000535076 ELOA3CA0A087WX78 387 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-201ENST00000535076 A0A1B0GUA9 196 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 ELOA3DA6NLF2 546 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-201ENST00000535076 TRIM64CA6NLI5 447 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-201ENST00000535076 PRMT3O60678 531 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 ZBED4O75132 1171 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 SIN3BO75182 1162 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 PROCP04070 461 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 RLBP1P12271 317 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 DDX10Q13206 875 aaKnown RBP5.98□□□□□ -1.45
SNHG1-201ENST00000535076 DGKZQ13574 1117 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 NBPF8Q3BBV2 869 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 ELOA3BQ3SY89 546 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 TMEM164Q5U3C3 297 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 SEPT14Q6ZU15 432 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 C8orf86Q6ZUL3 223 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 KRT77Q7Z794 578 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 GAS2L3Q86XJ1 694 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 TTC30BQ8N4P2 665 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 ELOA3Q8NG57 546 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 ENOX1Q8TC92 643 aaKnown RBP5.98□□□□□ -1.45
SNHG1-201ENST00000535076 KCNB2Q92953 911 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 EXOC4Q96A65 974 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 NACC2Q96BF6 587 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 DTNBP1Q96EV8 351 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 UIMC1Q96RL1 719 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 PAGR1Q9BTK6 254 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 BATF3Q9NR55 127 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 COMMD8Q9NX08 183 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 TUBA8Q9NY65 449 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms