RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 H0YGN5 161 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 TNNI2P48788 182 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 HYAL2Q12891 473 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 PRPF40BQ6NWY9 871 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 ERMP1Q7Z2K6 904 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 CEP120Q8N960 986 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 BHMTQ93088 406 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 ABCB6Q9NP58 842 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 GGT7Q9UJ14 662 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 TRAK1Q9UPV9 953 aa6.73□□□□□ -1.33
ECHDC1-223ENST00000534442 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 SOX1O00570 391 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 TRPA1O75762 1119 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 PSAPP07602 524 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 FGFR3P22607 806 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 GSTT1P30711 240 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 MAP2K2P36507 400 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 CTBSQ01459 385 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 SLC43A3Q8NBI5 491 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 OSMRQ99650 979 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 CAPN10Q9HC96 672 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 COPRSQ9NQ92 184 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 ERBINQ96RT1 1412 aa6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 TRPM3Q9HCF6 1732 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-223ENST00000534442 ARFGEF1Q9Y6D6 1849 aa6.71□□□□□ -1.33
ECHDC1-223ENST00000534442 TIAM2Q8IVF5 1701 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 NFKBIEO00221 500 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 FCGRTP55899 365 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 PLAURQ03405 335 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 SMIM5Q71RC9 77 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 CTU1Q7Z7A3 348 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 USP48Q86UV5 1035 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 NCAPG2Q86XI2 1143 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 CCNJLQ8IV13 435 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 NSUN5Q96P11 429 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 OXCT2Q9BYC2 517 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 DZANK1Q9NVP4 752 aa6.71□□□□□ -1.34
ECHDC1-223ENST00000534442 GPR25O00155 361 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 C2CD2LO14523 706 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 PPFIA3O75145 1194 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 NRLP54845 237 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 KCTD2Q14681 263 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 LDHDQ86WU2 507 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 TRPM4Q8TD43 1214 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 BRCA1P38398 1863 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-223ENST00000534442 IQGAP3Q86VI3 1631 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 KDM6AO15550 1401 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 CRB1P82279 1406 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 EEA1Q15075 1411 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 J3QW42 95 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 GRIA4P48058 902 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 RASSF7Q02833 373 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 SF3A1Q15459 793 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 VWA5B2Q8N398 1253 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 DEFB123Q8N688 67 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 TTF2Q9UNY4 1162 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 PHF24Q9UPV7 400 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 ZFHX4Q86UP3 3567 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 WNK3Q9BYP7 1800 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
ECHDC1-223ENST00000534442 CASKIN1Q8WXD9 1431 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 LMO7Q8WWI1 1683 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 RGPD8O14715 1765 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 LOC102724428A0A0B4J2F2 783 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 LCE2BO14633 110 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 XRCC5P13010 732 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 DPEP1P16444 411 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 SIK1P57059 783 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 TGFB2P61812 414 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 GPLD1P80108 840 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 SPRED3Q2MJR0 410 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 CIAPIN1Q6FI81 312 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 Q7L0L9 218 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 DCAF5Q96JK2 942 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 BHLHE41Q9C0J9 482 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 KBTBD4Q9NVX7 518 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 PPM1HQ9ULR3 514 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 AKAP2Q9Y2D5 859 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 ANKRD30BQ9BXX2 1392 aa6.68□□□□□ -1.34
ECHDC1-223ENST00000534442 CACNA1BQ00975 2339 aa6.67□□□□□ -1.34
ECHDC1-223ENST00000534442 COL5A2P05997 1499 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-223ENST00000534442 FBXO24O75426 580 aa6.67□□□□□ -1.34
ECHDC1-223ENST00000534442 ITPKAP23677 461 aa6.67□□□□□ -1.34
ECHDC1-223ENST00000534442 DTHD1Q6ZMT9 781 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms