RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-215ENST00000534417 DNTTIP2Q5QJE6 756 aaKnown RBP12.09□□□□□ -0.47
TTC17-215ENST00000534417 ENAHQ8N8S7 591 aaPredicted RBP12.09□□□□□ -0.47
TTC17-215ENST00000534417 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
TTC17-215ENST00000534417 CCDC150Q8NCX0 1101 aa12.09□□□□□ -0.47
TTC17-215ENST00000534417 NLRP3Q96P20 1036 aa12.09□□□□□ -0.47
TTC17-215ENST00000534417 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
TTC17-215ENST00000534417 KCNH3Q9ULD8 1083 aa12.09□□□□□ -0.47
TTC17-215ENST00000534417 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
TTC17-215ENST00000534417 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.47
TTC17-215ENST00000534417 NAV1Q8NEY1 1877 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 BTBD18B2RXH4 712 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 XBP1P17861 261 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 TM4SF1P30408 202 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 MYL5Q02045 173 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 TROAPQ12815 778 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 PKN1Q16512 942 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 KANK3Q6NY19 840 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 CTR9Q6PD62 1173 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 FAM177A1Q8N128 213 aaPredicted RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 SDR42E1Q8WUS8 393 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 ANKS1AQ92625 1134 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 TNFRSF25Q93038 417 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 SETDB2Q96T68 719 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 HSD3B7Q9H2F3 369 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
TTC17-215ENST00000534417 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
TTC17-215ENST00000534417 CBFA2T2O43439 604 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 HIBADHP31937 336 aaKnown RBP12.07□□□□□ -0.48
TTC17-215ENST00000534417 SARSP49591 514 aaKnown RBP12.07□□□□□ -0.48
TTC17-215ENST00000534417 DYNLL1P63167 89 aaKnown RBP12.07□□□□□ -0.48
TTC17-215ENST00000534417 MECOMQ03112 1051 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
TTC17-215ENST00000534417 RRP12Q5JTH9 1297 aaKnown RBP12.07□□□□□ -0.48
TTC17-215ENST00000534417 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
TTC17-215ENST00000534417 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 CATIPQ7Z7H3 387 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 IQCA1Q86XH1 822 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 SPATA20Q8TB22 786 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 AATFQ9NY61 560 aaKnown RBP eCLIP12.07□□□□□ -0.48
TTC17-215ENST00000534417 FAM13BQ9NYF5 915 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 PAXBP1Q9Y5B6 917 aa12.07□□□□□ -0.48
TTC17-215ENST00000534417 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 NUTM2BA6NNL0 878 aaPredicted RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 NUTM2EB1AL46 878 aaPredicted RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 UBE2Q2LH0YL09 131 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 TUBB4AP04350 444 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 HSPA1LP34931 641 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 CERS3Q8IU89 383 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 NUTM2AQ8IVF1 878 aaPredicted RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 ZKSCAN3Q9BRR0 538 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
TTC17-215ENST00000534417 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 LEMD3Q9Y2U8 911 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 CNTNAP5Q8WYK1 1306 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 LTBP1Q14766 1721 aa12.06□□□□□ -0.48
TTC17-215ENST00000534417 FOCADQ5VW36 1801 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 A0A087WWV3 80 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 PSDA5PKW4 1024 aaPredicted RBP12.05□□□□□ -0.48
TTC17-215ENST00000534417 MINDY4BA8MYZ0 360 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 ACTN4O43707 911 aaKnown RBP12.05□□□□□ -0.48
TTC17-215ENST00000534417 KRT2P35908 639 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 PPP4CP60510 307 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 FANCCQ00597 558 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 NPY5RQ15761 445 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 CCDC178Q5BJE1 867 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 MLKLQ8NB16 471 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 CNNM3Q8NE01 707 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 ERCC4Q92889 916 aaPredicted RBP12.05□□□□□ -0.48
TTC17-215ENST00000534417 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 XPO4Q9C0E2 1151 aaKnown RBP12.05□□□□□ -0.48
TTC17-215ENST00000534417 DACH1Q9UI36 760 aa12.05□□□□□ -0.48
TTC17-215ENST00000534417 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
TTC17-215ENST00000534417 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
TTC17-215ENST00000534417 A0A0G2JS52 829 aa12.04□□□□□ -0.48
TTC17-215ENST00000534417 TRIM75PA6NK02 468 aa12.04□□□□□ -0.48
TTC17-215ENST00000534417 USP17L12C9JPN9 530 aa12.04□□□□□ -0.48
TTC17-215ENST00000534417 USP17L21D6R901 530 aa12.04□□□□□ -0.48
TTC17-215ENST00000534417 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
TTC17-215ENST00000534417 ZPR1O75312 459 aa12.04□□□□□ -0.48
TTC17-215ENST00000534417 SKILP12757 684 aa12.04□□□□□ -0.48
TTC17-215ENST00000534417 KLRK1P26718 216 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms