RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 MIPEPQ99797 713 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 SLITRK5O94991 958 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 ZNF865P0CJ78 1059 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-219ENST00000534049 KIR3DL1P43629 444 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 PRAMEF13Q5VWM6 474 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 LETMD1Q6P1Q0 360 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 GATAD2BQ8WXI9 593 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 PLAGL2Q9UPG8 496 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 TLR6Q9Y2C9 796 aa6.73□□□□□ -1.33
ITGB1-219ENST00000534049 FAM155AB1AL88 458 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-219ENST00000534049 CILPO75339 1184 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 GBP2P32456 591 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-219ENST00000534049 ETV3P41162 512 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-219ENST00000534049 NKG7Q16617 165 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 SPRED2Q7Z698 418 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 SPACA3Q8IXA5 215 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 MFSD4AQ8N468 514 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 GIPC2Q8TF65 315 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-219ENST00000534049 ASIC4Q96FT7 647 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 TMEM87BQ96K49 555 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 RHOVQ96L33 236 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
ITGB1-219ENST00000534049 CD8BP10966 210 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 ITGB5P18084 799 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 CDK8P49336 464 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 YARSP54577 528 aaKnown RBP6.71□□□□□ -1.34
ITGB1-219ENST00000534049 BNIP3Q12983 259 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 ZNF792Q3KQV3 632 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 SLC23A3Q6PIS1 610 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
ITGB1-219ENST00000534049 MCATQ8IVS2 390 aaKnown RBP6.71□□□□□ -1.34
ITGB1-219ENST00000534049 HOMEZQ8IX15 550 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 PI4K2BQ8TCG2 481 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 U3KQE9 123 aa6.71□□□□□ -1.34
ITGB1-219ENST00000534049 ROBO2Q9HCK4 1378 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 FAM221AA4D161 298 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 PF4P02776 101 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 MLECQ14165 292 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 MPP2Q14168 576 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 TMEM201Q5SNT2 666 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 THAP5Q7Z6K1 395 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 WFDC3Q8IUB2 231 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 LMCD1Q9NZU5 365 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 TJP2Q9UDY2 1190 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 PITPNM2Q9BZ72 1349 aa6.7□□□□□ -1.34
ITGB1-219ENST00000534049 PLCG1P19174 1290 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
ITGB1-219ENST00000534049 IKZF1Q13422 519 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 MRPL58Q14197 206 aaKnown RBP6.69□□□□□ -1.34
ITGB1-219ENST00000534049 HS2ST1Q7LGA3 356 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 ERMP1Q7Z2K6 904 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 ATG4DQ86TL0 474 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-219ENST00000534049 PIWIL2Q8TC59 973 aaKnown RBP6.69□□□□□ -1.34
ITGB1-219ENST00000534049 CCDC120Q96HB5 630 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 PRR36Q9H6K5 1346 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 RB1CC1Q8TDY2 1594 aa6.69□□□□□ -1.34
ITGB1-219ENST00000534049 F13A1P00488 732 aa6.68□□□□□ -1.34
ITGB1-219ENST00000534049 BNC2Q6ZN30 1099 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-219ENST00000534049 CYB5D2Q8WUJ1 264 aa6.68□□□□□ -1.34
ITGB1-219ENST00000534049 RC3H2Q9HBD1 1191 aaKnown RBP6.68□□□□□ -1.34
ITGB1-219ENST00000534049 KCNQ5Q9NR82 932 aa6.68□□□□□ -1.34
ITGB1-219ENST00000534049 CAPN6Q9Y6Q1 641 aa6.68□□□□□ -1.34
ITGB1-219ENST00000534049 CWF19L2Q2TBE0 894 aaKnown RBP6.67□□□□□ -1.34
ITGB1-219ENST00000534049 FAM196AQ6ZSG2 479 aa6.67□□□□□ -1.34
ITGB1-219ENST00000534049 SLFN12Q8IYM2 578 aa6.67□□□□□ -1.34
ITGB1-219ENST00000534049 GOLM1Q8NBJ4 401 aa6.67□□□□□ -1.34
ITGB1-219ENST00000534049 FAM13CQ8NE31 585 aa6.67□□□□□ -1.34
ITGB1-219ENST00000534049 ACSF2Q96CM8 615 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-219ENST00000534049 LRRC3Q9BY71 257 aa6.67□□□□□ -1.34
ITGB1-219ENST00000534049 SUPT16HQ9Y5B9 1047 aaKnown RBP6.67□□□□□ -1.34
ITGB1-219ENST00000534049 ZP2Q05996 745 aa6.66□□□□□ -1.34
ITGB1-219ENST00000534049 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
ITGB1-219ENST00000534049 XAGE3Q8WTP9 111 aa6.66□□□□□ -1.34
ITGB1-219ENST00000534049 MBNL3Q9NUK0 354 aaKnown RBP6.66□□□□□ -1.34
ITGB1-219ENST00000534049 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
ITGB1-219ENST00000534049 CEP131Q9UPN4 1083 aa6.66□□□□□ -1.34
ITGB1-219ENST00000534049 NACADO15069 1562 aa6.65□□□□□ -1.34
ITGB1-219ENST00000534049 MINDY4BA8MYZ0 360 aa6.65□□□□□ -1.34
ITGB1-219ENST00000534049 RNASE1P07998 156 aaKnown RBP6.65□□□□□ -1.34
ITGB1-219ENST00000534049 EIF4A3P38919 411 aaKnown RBP6.65□□□□□ -1.34
ITGB1-219ENST00000534049 TMPRSS7Q7RTY8 843 aa6.65□□□□□ -1.34
ITGB1-219ENST00000534049 FLAD1Q8NFF5 587 aa6.65□□□□□ -1.34
ITGB1-219ENST00000534049 DPH2Q9BQC3 489 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-219ENST00000534049 TRIT1Q9H3H1 467 aaKnown RBP6.65□□□□□ -1.34
ITGB1-219ENST00000534049 GGT7Q9UJ14 662 aa6.65□□□□□ -1.34
ITGB1-219ENST00000534049 KCNH3Q9ULD8 1083 aa6.65□□□□□ -1.34
ITGB1-219ENST00000534049 HTR3BO95264 441 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 CBX7O95931 251 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 CD96P40200 585 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 CHMP4BP1P59074 171 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 FAM160A1Q05DH4 1040 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 CDKAL1Q5VV42 579 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 CDH24Q86UP0 819 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms