RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 ZNF333Q96JL9 665 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
SDHD-208ENST00000534010 ECHDC1Q9NTX5 307 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 ZBTB21Q9ULJ3 1066 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 MAGEB6P1A0A0J9YX57 407 aa13.11□□□□□ -0.31
SDHD-208ENST00000534010 TRIM75PA6NK02 468 aa13.11□□□□□ -0.31
SDHD-208ENST00000534010 PRMT2P55345 433 aa13.11□□□□□ -0.31
SDHD-208ENST00000534010 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
SDHD-208ENST00000534010 AAMPQ13685 434 aa13.11□□□□□ -0.31
SDHD-208ENST00000534010 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
SDHD-208ENST00000534010 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
SDHD-208ENST00000534010 CPA4Q9UI42 421 aa13.11□□□□□ -0.31
SDHD-208ENST00000534010 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 HLA-DOAP06340 250 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 TTC6Q86TZ1 520 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
SDHD-208ENST00000534010 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 SRRDQ9UH36 339 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
SDHD-208ENST00000534010 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
SDHD-208ENST00000534010 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 USP5P45974 858 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 HMGCS2P54868 508 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 MLLT1Q03111 559 aaPredicted RBP13.09□□□□□ -0.31
SDHD-208ENST00000534010 ARHGEF6Q15052 776 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
SDHD-208ENST00000534010 AS3MTQ9HBK9 375 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
SDHD-208ENST00000534010 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
SDHD-208ENST00000534010 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 PRKAB2O43741 272 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 GDF11O95390 407 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 OSBPP22059 807 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 PSMC4P43686 418 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 SOX10P56693 466 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 C12orf60Q5U649 245 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
SDHD-208ENST00000534010 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
SDHD-208ENST00000534010 ARMT1Q9H993 441 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 CEP290O15078 2479 aa13.08□□□□□ -0.32
SDHD-208ENST00000534010 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 MBD4O95243 580 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 GH2P01242 217 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
SDHD-208ENST00000534010 MTMR2Q13614 643 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 SMC5Q8IY18 1101 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
SDHD-208ENST00000534010 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
SDHD-208ENST00000534010 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.07□□□□□ -0.32
SDHD-208ENST00000534010 KIAA1683Q9H0B3 1180 aa13.07□□□□□ -0.32
SDHD-208ENST00000534010 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 IRF5Q13568 498 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
SDHD-208ENST00000534010 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 TSHZ3Q63HK5 1081 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 LBX2Q6XYB7 198 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 PNMA3Q9UL41 463 aa13.06□□□□□ -0.32
SDHD-208ENST00000534010 DNAH12Q6ZR08 3092 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 A0A1W2PRG0 241 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 GSG1L2A8MUP6 293 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 FOXP2O15409 715 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 CYP2D6P10635 497 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
SDHD-208ENST00000534010 KIF22Q14807 665 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 ZSCAN25Q6NSZ9 544 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 TICAM2Q86XR7 235 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 APPBP2Q92624 585 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
SDHD-208ENST00000534010 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
SDHD-208ENST00000534010 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
SDHD-208ENST00000534010 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
SDHD-208ENST00000534010 FCGRTP55899 365 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 PRKCZQ05513 592 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 ABCB5Q2M3G0 1257 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 PXYLP1Q8TE99 480 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms