RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 STAG1Q8WVM7 1258 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-218ENST00000533915 KRT23Q9C075 422 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 ECE1P42892 770 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 KRT32Q14532 448 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 DEFB115Q30KQ5 88 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-218ENST00000533915 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-218ENST00000533915 ERO1BQ86YB8 467 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 ESR2Q92731 530 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
CMTM1-218ENST00000533915 AS3MTQ9HBK9 375 aa16.67■□□□□ 0.26
CMTM1-218ENST00000533915 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
CMTM1-218ENST00000533915 GDF11O95390 407 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 CYP21A2P08686 494 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 FGRP09769 529 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 PPATQ06203 517 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
CMTM1-218ENST00000533915 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
CMTM1-218ENST00000533915 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
CMTM1-218ENST00000533915 RASSF10A6NK89 507 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 SLC27A2O14975 620 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 PRDM1O75626 825 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 GH2P01242 217 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 RASA1P20936 1047 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 EVX2Q03828 476 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 CCDC178Q5BJE1 867 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
CMTM1-218ENST00000533915 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
CMTM1-218ENST00000533915 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
CMTM1-218ENST00000533915 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
CMTM1-218ENST00000533915 PTPRAP18433 802 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 TFAP4Q01664 338 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
CMTM1-218ENST00000533915 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 AKR1B1P15121 316 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 HSPA4P34932 840 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 PPIL2Q13356 520 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
CMTM1-218ENST00000533915 E7EWF7 191 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
CMTM1-218ENST00000533915 NOGQ13253 232 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 SART3Q15020 963 aaKnown RBP16.62■□□□□ 0.25
CMTM1-218ENST00000533915 TSGA10IPQ3SY00 556 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
CMTM1-218ENST00000533915 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
CMTM1-218ENST00000533915 CXCL11O14625 94 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 SLC10A3P09131 477 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 PSMA5P28066 241 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 GTF2A2P52657 109 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 ICA1Q05084 483 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 SNAPC2Q13487 334 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
CMTM1-218ENST00000533915 SEPT2Q15019 361 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 FEZ1Q99689 392 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 NEDD4P46934 1319 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
CMTM1-218ENST00000533915 ERICH2A1L162 156 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 B4E1Z4 1266 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 KDM4AO75164 1064 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 USP14P54578 494 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 INHBEP58166 350 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms