RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 DHX37Q8IY37 1157 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 NANOS1Q8WY41 292 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 ALKBH8Q96BT7 664 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 CSRNP1Q96S65 589 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 PHAXQ9H814 394 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 DDX21Q9NR30 783 aaKnown RBP eCLIP7.1□□□□□ -1.27
CHKA-208ENST00000533910 HYPKQ9NX55 129 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 COL5A3P25940 1745 aaPredicted RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 EIF2S2P20042 333 aaKnown RBP7.09□□□□□ -1.27
CHKA-208ENST00000533910 IRS1P35568 1242 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 DAB2P98082 770 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 HDLBPQ00341 1268 aaKnown RBP7.09□□□□□ -1.27
CHKA-208ENST00000533910 VPS72Q15906 364 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 SKAP1Q86WV1 359 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 UNC5CLQ8IV45 518 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 SIRT2Q8IXJ6 389 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 ANKRD44Q8N8A2 993 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 DDX54Q8TDD1 881 aaKnown RBP7.09□□□□□ -1.27
CHKA-208ENST00000533910 MEIS3Q99687 375 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 RUBCNLQ9H714 662 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 ANKRD36CQ5JPF3 1778 aa7.09□□□□□ -1.27
CHKA-208ENST00000533910 TUBGCP6Q96RT7 1819 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 A0A1W2PNR3 127 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 SLC35F4A4IF30 521 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 POLR3DP05423 398 aaPredicted RBP7.08□□□□□ -1.28
CHKA-208ENST00000533910 GNAI3P08754 354 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 INPP5BP32019 993 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 USP5P45974 858 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 ATP2B2Q01814 1243 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 CEP85Q6P2H3 762 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 RPAP2Q8IXW5 612 aaPredicted RBP7.08□□□□□ -1.28
CHKA-208ENST00000533910 DNAAF4Q8WXU2 420 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 PIK3R5Q8WYR1 880 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 GCC1Q96CN9 775 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 RTCBQ9Y3I0 505 aaKnown RBP7.08□□□□□ -1.28
CHKA-208ENST00000533910 KCNMB2Q9Y691 235 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 ATRNO75882 1429 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 SBF2Q86WG5 1849 aa7.08□□□□□ -1.28
CHKA-208ENST00000533910 PI4KAP2A4QPH2 592 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 EXOC5O00471 708 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 SORBS3O60504 671 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 ANXA1P04083 346 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 PCSK2P16519 638 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 ITGA6P23229 1130 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 HSPA1LP34931 641 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 NUCB1Q02818 461 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 DDB1Q16531 1140 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 BEND3Q5T5X7 828 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 KSR2Q6VAB6 950 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 SV2AQ7L0J3 742 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 TMC4Q7Z404 712 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 GPR161Q8N6U8 529 aaKnown RBP7.07□□□□□ -1.28
CHKA-208ENST00000533910 PI4KAP1Q8N8J0 262 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 TTC16Q8NEE8 873 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 EPS8L3Q8TE67 593 aaKnown RBP7.07□□□□□ -1.28
CHKA-208ENST00000533910 PIGBQ92521 554 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
CHKA-208ENST00000533910 SRCIN1Q9C0H9 1055 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 TMEM63CQ9P1W3 806 aa7.07□□□□□ -1.28
CHKA-208ENST00000533910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
CHKA-208ENST00000533910 BTAF1O14981 1849 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 TNFRSF21O75509 655 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 DDX58O95786 925 aaKnown RBP7.06□□□□□ -1.28
CHKA-208ENST00000533910 GNAI2P04899 355 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 MARCH10Q8NA82 808 aaPredicted RBP7.06□□□□□ -1.28
CHKA-208ENST00000533910 C8orf37Q96NL8 207 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 GAS2L1Q99501 681 aaPredicted RBP7.06□□□□□ -1.28
CHKA-208ENST00000533910 ZCCHC2Q9C0B9 1178 aaKnown RBP7.06□□□□□ -1.28
CHKA-208ENST00000533910 USP44Q9H0E7 712 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 DCTPP1Q9H773 170 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 ATG3Q9NT62 314 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 USP16Q9Y5T5 823 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 LY75O60449 1722 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 COL15A1P39059 1388 aa7.06□□□□□ -1.28
CHKA-208ENST00000533910 BCORQ6W2J9 1755 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 UTYO14607 1347 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 CDC14CA4D256 554 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 RNF225M0QZC1 329 aaPredicted RBP7.05□□□□□ -1.28
CHKA-208ENST00000533910 HMMRO75330 724 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 CTSHP09668 335 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 ERCC5P28715 1186 aaPredicted RBP7.05□□□□□ -1.28
CHKA-208ENST00000533910 RGS3P49796 1198 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 ARSDP51689 593 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 KRT76Q01546 638 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHKA-208ENST00000533910 ALG1LQ6GMV1 187 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 ZNF438Q7Z4V0 828 aa7.05□□□□□ -1.28
CHKA-208ENST00000533910 CHD1LQ86WJ1 897 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms