RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RNF187Q5TA31 235 aaPredicted RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 SND1Q7KZF4 910 aaKnown RBP eCLIP4.53□□□□□ -1.68
SOX6-217ENST00000533870 TAOK1Q7L7X3 1001 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 KRT25Q7Z3Z0 450 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 ABTB2Q8N961 1025 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 DYDC1Q8WWB3 177 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 RAB17Q9H0T7 212 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 SOS2Q07890 1332 aaPredicted RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 GRID2IPA4D2P6 1211 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 ATP5HO75947 161 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 IDEP14735 1019 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 ARID4AP29374 1257 aaPredicted RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 CORO7P57737 925 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 EIF4A1P60842 406 aaKnown RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 TMEM67Q5HYA8 995 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 SPTY2D1Q68D10 685 aaPredicted RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 FOXR2Q6PJQ5 311 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 LRIG3Q6UXM1 1119 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 SLF2Q8IX21 1173 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 FMR1NBQ8N0W7 255 aaPredicted RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 TCP11Q8WWU5 503 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 METTL14Q9HCE5 456 aaKnown RBP4.53□□□□□ -1.68
SOX6-217ENST00000533870 RIC8AQ9NPQ8 531 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 ADCY10Q96PN6 1610 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 SYNRGQ9UMZ2 1314 aa4.53□□□□□ -1.68
SOX6-217ENST00000533870 ANKARQ7Z5J8 1434 aa4.53□□□□□ -1.69
SOX6-217ENST00000533870 IRX4P78413 519 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 NR1H3Q13133 447 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 POSTNQ15063 836 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 CNNM4Q6P4Q7 775 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 C16orf71Q8IYS4 520 aaPredicted RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 BANK1Q8NDB2 785 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 ENGASEQ8NFI3 743 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 PI4K2BQ8TCG2 481 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 AGXT2Q9BYV1 514 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 TRIM6Q9C030 488 aaPredicted RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 CSRNP2Q9H175 543 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 ADGRG1Q9Y653 693 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 EPN1Q9Y6I3 576 aaPredicted RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 CDK17Q00537 523 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 SATB1Q01826 763 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 PDE4BQ07343 736 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 PKP1Q13835 747 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 GCKRQ14397 625 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 HLTFQ14527 1009 aaKnown RBP eCLIP4.52□□□□□ -1.69
SOX6-217ENST00000533870 HSP90AA5PQ58FG0 334 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 MAP3K21Q5TCX8 1036 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 KIF6Q6ZMV9 814 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 SPATA24Q86W54 205 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 SMC1BQ8NDV3 1235 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 PLBD2Q8NHP8 589 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 GFM2Q969S9 779 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 CDC5LQ99459 802 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 CCDC8Q9H0W5 538 aaPredicted RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 TPCN1Q9ULQ1 816 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 L1RE1Q9UN81 338 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 NOC2LQ9Y3T9 749 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 MRFAP1Q9Y605 127 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 SOX12O15370 315 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 ZEB2O60315 1214 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 LONP1P36776 959 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 USP14P54578 494 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 RAD51AP2Q09MP3 1159 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 TBC1D8BQ0IIM8 1120 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 SGMS1Q86VZ5 419 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 VPS37DQ86XT2 251 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 MMGT1Q8N4V1 131 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 HAUS7Q99871 368 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 FOXP3Q9BZS1 431 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 NKIRAS1Q9NYS0 192 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 ZRANB1Q9UGI0 708 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 LCMT1Q9UIC8 334 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 MFAP3LO75121 409 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 HIP1RO75146 1068 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 NBPF20Q3BBV1 942 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 TDRD12Q587J7 1177 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 LMOD2Q6P5Q4 547 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 ZNF710Q8N1W2 664 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 EAF2Q96CJ1 260 aaPredicted RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 BIN1O00499 593 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 STARD3NLO95772 234 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 CCNE1P24864 410 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 AARSP49588 968 aaKnown RBP eCLIP4.52□□□□□ -1.69
SOX6-217ENST00000533870 WDR78Q5VTH9 848 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 MAML3Q96JK9 1138 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 TULP2O00295 520 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 PSMD14O00487 310 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 IRX5P78411 483 aaPredicted RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 DYNC1I2Q13409 638 aaKnown RBP4.52□□□□□ -1.69
SOX6-217ENST00000533870 C6orf50Q9HD87 102 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 EXOC1Q9NV70 894 aa4.52□□□□□ -1.69
SOX6-217ENST00000533870 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.52□□□□□ -1.69
SOX6-217ENST00000533870 DLC1Q96QB1 1528 aa4.51□□□□□ -1.69
SOX6-217ENST00000533870 PNMA6EA0A0J9YXQ4 647 aa4.51□□□□□ -1.69
SOX6-217ENST00000533870 SSU72P8A0A1W2PR75 194 aa4.51□□□□□ -1.69
SOX6-217ENST00000533870 MIF4GDA9UHW6 222 aaKnown RBP4.51□□□□□ -1.69
SOX6-217ENST00000533870 EIF3CLB5ME19 914 aaKnown RBP4.51□□□□□ -1.69
SOX6-217ENST00000533870 BRD2P25440 801 aaKnown RBP4.51□□□□□ -1.69
SOX6-217ENST00000533870 CASP14P31944 242 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms