RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ADAMTSL3P82987 1691 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 CCP110O43303 1012 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 ZSCAN12O43309 604 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 CASQ1P31415 396 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 PUM3Q15397 648 aaKnown RBP22.07■■□□□ 1.12
CAPN1-226ENST00000533820 SLC4A9Q96Q91 983 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 TSPYL1Q9H0U9 437 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 C4BP0C0L5 1744 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 ARHGAP6O43182 974 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 TEX33O43247 280 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 TC2NQ8N9U0 490 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 EPSTI1Q96J88 318 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 MPHOSPH8Q99549 860 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 NOL10Q9BSC4 688 aaKnown RBP22.07■■□□□ 1.12
CAPN1-226ENST00000533820 VPS54Q9P1Q0 977 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 ABCF2Q9UG63 623 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 ERICH2A1L162 156 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 IFNAR1P17181 557 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 KCNJ6P48051 423 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 GTF2A1P52655 376 aaPredicted RBP22.06■■□□□ 1.12
CAPN1-226ENST00000533820 GYS2P54840 703 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 CCDC34Q96HJ3 373 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 HOOK1Q9UJC3 728 aaKnown RBP22.06■■□□□ 1.12
CAPN1-226ENST00000533820 ZNF142P52746 1687 aaPredicted RBP22.06■■□□□ 1.12
CAPN1-226ENST00000533820 SPECC1LQ69YQ0 1117 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 LPIN2Q92539 896 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 GEMIN8Q9NWZ8 242 aaKnown RBP22.06■■□□□ 1.12
CAPN1-226ENST00000533820 LRP2BPQ9P2M1 347 aa22.06■■□□□ 1.12
CAPN1-226ENST00000533820 CLGNO14967 610 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 TADA3O75528 432 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 ZCCHC17Q9NP64 241 aaKnown RBP22.05■■□□□ 1.12
CAPN1-226ENST00000533820 UQCRFS1P1P0C7P4 283 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 PTPREP23469 700 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 LIFRP42702 1097 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 SOWAHDA6NJG2 315 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 PDE8AO60658 829 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 PLA2G4AP47712 749 aa22.05■■□□□ 1.12
CAPN1-226ENST00000533820 SART3Q15020 963 aaKnown RBP22.05■■□□□ 1.12
CAPN1-226ENST00000533820 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
CAPN1-226ENST00000533820 CYP2D7A0A087X1C5 515 aa22.04■■□□□ 1.12
CAPN1-226ENST00000533820 ARID4AP29374 1257 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-226ENST00000533820 ARGLU1Q9NWB6 273 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-226ENST00000533820 MYH7P12883 1935 aa22.04■■□□□ 1.12
CAPN1-226ENST00000533820 WTIPA6NIX2 430 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-226ENST00000533820 NOM1Q5C9Z4 860 aaKnown RBP22.04■■□□□ 1.12
CAPN1-226ENST00000533820 EARS2Q5JPH6 523 aaKnown RBP22.04■■□□□ 1.12
CAPN1-226ENST00000533820 UBAC1Q9BSL1 405 aa22.04■■□□□ 1.12
CAPN1-226ENST00000533820 FAM237AA0A1B0GTK4 181 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 SLC5A1P13866 664 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 CRACR2BQ8N4Y2 399 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-226ENST00000533820 CCDC12Q8WUD4 166 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-226ENST00000533820 FAM53CQ9NYF3 392 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 A0A087X0B3 334 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 ZNF654Q8IZM8 581 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 WASF1Q92558 559 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 KRT23Q9C075 422 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 MRPL44Q9H9J2 332 aaKnown RBP22.03■■□□□ 1.12
CAPN1-226ENST00000533820 DHX8Q14562 1220 aaKnown RBP22.03■■□□□ 1.12
CAPN1-226ENST00000533820 RILPL1Q5EBL4 403 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 FANCBQ8NB91 859 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 TEX13AQ9BXU3 409 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-226ENST00000533820 RAI14Q9P0K7 980 aa22.03■■□□□ 1.12
CAPN1-226ENST00000533820 WNT7AO00755 349 aa22.02■■□□□ 1.12
CAPN1-226ENST00000533820 PPP2R3AQ06190 1150 aa22.02■■□□□ 1.12
CAPN1-226ENST00000533820 NACAP1Q9BZK3 213 aa22.02■■□□□ 1.12
CAPN1-226ENST00000533820 COL5A2P05997 1499 aaPredicted RBP22.02■■□□□ 1.12
CAPN1-226ENST00000533820 GPATCH11Q8N954 259 aa22.02■■□□□ 1.12
CAPN1-226ENST00000533820 CDHR2Q9BYE9 1310 aa22.02■■□□□ 1.11
CAPN1-226ENST00000533820 TFRCP02786 760 aaKnown RBP22.01■■□□□ 1.11
CAPN1-226ENST00000533820 AKAP17AQ02040 695 aaKnown RBP22.01■■□□□ 1.11
CAPN1-226ENST00000533820 MORC3Q14149 939 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 MLKLQ8NB16 471 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 CNNM2Q9H8M5 875 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 EFCC1Q9HA90 598 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 CYP19A1P11511 503 aaPredicted RBP22.01■■□□□ 1.11
CAPN1-226ENST00000533820 ZNF18P17022 549 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 TBX2Q13207 712 aaPredicted RBP22.01■■□□□ 1.11
CAPN1-226ENST00000533820 ZNF174Q15697 407 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 C10orf67Q8IYJ2 551 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 SHISA4Q96DD7 197 aa22.01■■□□□ 1.11
CAPN1-226ENST00000533820 PUF60Q9UHX1 559 aaKnown RBP22.01■■□□□ 1.11
CAPN1-226ENST00000533820 ACTN4O43707 911 aaKnown RBP22■■□□□ 1.11
CAPN1-226ENST00000533820 DEXIO95424 95 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 CD44P16070 742 aaKnown RBP22■■□□□ 1.11
CAPN1-226ENST00000533820 NUTM2AQ8IVF1 878 aaPredicted RBP22■■□□□ 1.11
CAPN1-226ENST00000533820 TNS2Q63HR2 1409 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 CYP7A1P22680 504 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 ADGRA1Q86SQ6 560 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 ENOX1Q8TC92 643 aaKnown RBP22■■□□□ 1.11
CAPN1-226ENST00000533820 YY1AP1Q9H869 796 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 V9GY48 417 aaPredicted RBP22■■□□□ 1.11
CAPN1-226ENST00000533820 EFCAB8A8MWE9 144 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 SLC4A8Q2Y0W8 1093 aa22■■□□□ 1.11
CAPN1-226ENST00000533820 ZNF512BQ96KM6 892 aaPredicted RBP22■■□□□ 1.11
CAPN1-226ENST00000533820 STX10O60499 249 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 SASH3O75995 380 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 CCT6AP40227 531 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms