RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 USP17L5A8MUK1 530 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 HMGCRP04035 888 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
COPB1-210ENST00000533533 RRP1BQ14684 758 aaKnown RBP10.64□□□□□ -0.71
COPB1-210ENST00000533533 SH3D19Q5HYK7 790 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 NECAB2Q7Z6G3 386 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 RPAP2Q8IXW5 612 aaPredicted RBP10.64□□□□□ -0.71
COPB1-210ENST00000533533 TEX11Q8IYF3 940 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 ASCC2Q9H1I8 757 aaPredicted RBP10.64□□□□□ -0.71
COPB1-210ENST00000533533 RAI14Q9P0K7 980 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 STAP2Q9UGK3 403 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 HERC5Q9UII4 1024 aaKnown RBP10.64□□□□□ -0.71
COPB1-210ENST00000533533 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 DNAH12Q6ZR08 3092 aa10.64□□□□□ -0.71
COPB1-210ENST00000533533 FOCADQ5VW36 1801 aa10.63□□□□□ -0.71
COPB1-210ENST00000533533 MCAMP43121 646 aa10.63□□□□□ -0.71
COPB1-210ENST00000533533 ANKLE1Q8NAG6 615 aa10.63□□□□□ -0.71
COPB1-210ENST00000533533 DIS3LQ8TF46 1054 aaKnown RBP10.63□□□□□ -0.71
COPB1-210ENST00000533533 AS3MTQ9HBK9 375 aa10.63□□□□□ -0.71
COPB1-210ENST00000533533 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
COPB1-210ENST00000533533 PI4KBQ9UBF8 816 aa10.63□□□□□ -0.71
COPB1-210ENST00000533533 LAMA2P24043 3122 aaKnown RBP10.62□□□□□ -0.71
COPB1-210ENST00000533533 RPTORQ8N122 1335 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 DDX60LQ5H9U9 1706 aaKnown RBP10.62□□□□□ -0.71
COPB1-210ENST00000533533 SOX1O00570 391 aaPredicted RBP10.62□□□□□ -0.71
COPB1-210ENST00000533533 UQCRFS1P1P0C7P4 283 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 BACE1P56817 501 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 ERC1Q8IUD2 1116 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
COPB1-210ENST00000533533 WDR18Q9BV38 432 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
COPB1-210ENST00000533533 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
COPB1-210ENST00000533533 MORF4L1Q9UBU8 362 aa10.62□□□□□ -0.71
COPB1-210ENST00000533533 BAG3O95817 575 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 ASNSP08243 561 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 PLCG2P16885 1265 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 HOXA7P31268 230 aaPredicted RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 BMP8BP34820 402 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 IRX3P78415 501 aaPredicted RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 TRIM32Q13049 653 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 MTMR2Q13614 643 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 TNNI3KQ59H18 835 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 SIRT2Q8IXJ6 389 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 TRIB2Q92519 343 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 LRCH3Q96II8 777 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 P2RX7Q99572 595 aaKnown RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 GDF15Q99988 308 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 IL1RAPL2Q9NP60 686 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 AATFQ9NY61 560 aaKnown RBP eCLIP10.61□□□□□ -0.71
COPB1-210ENST00000533533 TMOD4Q9NZQ9 345 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
COPB1-210ENST00000533533 FPGT-TNNI3KV9GXZ4 949 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
COPB1-210ENST00000533533 MYH1P12882 1939 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 XRCC5P13010 732 aaKnown RBP10.6□□□□□ -0.71
COPB1-210ENST00000533533 CYP2B6P20813 491 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
COPB1-210ENST00000533533 PPP4CP60510 307 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 CCDC158Q5M9N0 1113 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 MAP3K21Q5TCX8 1036 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 NAA16Q6N069 864 aaPredicted RBP10.6□□□□□ -0.71
COPB1-210ENST00000533533 AACSQ86V21 672 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 METTL16Q86W50 562 aaKnown RBP10.6□□□□□ -0.71
COPB1-210ENST00000533533 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
COPB1-210ENST00000533533 C7orf61Q8IZ16 206 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 SLC17A8Q8NDX2 589 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 GPRC5AQ8NFJ5 357 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 DBNDD2Q9BQY9 259 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 TXNRD2Q9NNW7 524 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 SNRKQ9NRH2 765 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 OGDHLQ9ULD0 1010 aa10.6□□□□□ -0.71
COPB1-210ENST00000533533 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
COPB1-210ENST00000533533 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 PEX10O60683 326 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
COPB1-210ENST00000533533 HERVK_113P62684 666 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 JAG1P78504 1218 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 ADGRA1Q86SQ6 560 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 MAPKAPK5Q8IW41 473 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 CLASRPQ8N2M8 674 aaKnown RBP10.59□□□□□ -0.71
COPB1-210ENST00000533533 RHPN1Q8TCX5 695 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 TGFBRAP1Q8WUH2 860 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 KIF1BPQ96EK5 621 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 C11orf49Q9H6J7 331 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 GPR108Q9NPR9 543 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 GINM1Q9NU53 330 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 UNC80Q8N2C7 3258 aa10.59□□□□□ -0.71
COPB1-210ENST00000533533 FLT1P17948 1338 aa10.58□□□□□ -0.71
COPB1-210ENST00000533533 RAB11FIP3O75154 756 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms