RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TEX35Q5T0J7 233 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 TRMT44Q8IYL2 757 aaKnown RBP18.98■□□□□ 0.63
CTSB-228ENST00000533455 FAM177A1Q8N128 213 aaPredicted RBP18.98■□□□□ 0.63
CTSB-228ENST00000533455 LPIN2Q92539 896 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 PRDM11Q9NQV5 511 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 PCDHB6Q9Y5E3 794 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 ITGB4P16144 1822 aa18.97■□□□□ 0.63
CTSB-228ENST00000533455 IRS4O14654 1257 aaPredicted RBP18.97■□□□□ 0.63
CTSB-228ENST00000533455 HLFQ16534 295 aa18.97■□□□□ 0.63
CTSB-228ENST00000533455 ZNF827Q17R98 1081 aa18.97■□□□□ 0.63
CTSB-228ENST00000533455 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
CTSB-228ENST00000533455 CRACR2BQ8N4Y2 399 aaPredicted RBP18.97■□□□□ 0.63
CTSB-228ENST00000533455 NAA15Q9BXJ9 866 aaKnown RBP18.97■□□□□ 0.63
CTSB-228ENST00000533455 SAMSN1Q9NSI8 373 aaKnown RBP18.97■□□□□ 0.63
CTSB-228ENST00000533455 NHSL1Q5SYE7 1610 aa18.97■□□□□ 0.63
CTSB-228ENST00000533455 GSG1L2A8MUP6 293 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 AKR1B15C9JRZ8 316 aaPredicted RBP18.96■□□□□ 0.63
CTSB-228ENST00000533455 MAP3K12Q12852 859 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 SART3Q15020 963 aaKnown RBP18.96■□□□□ 0.63
CTSB-228ENST00000533455 JAKMIP3Q5VZ66 844 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 MFSD6Q6ZSS7 791 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 APTXQ7Z2E3 356 aaKnown RBP18.96■□□□□ 0.63
CTSB-228ENST00000533455 SPATA5Q8NB90 893 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 GOLGA1Q92805 767 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 MROH5Q6ZUA9 1318 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 ERICH4A6NGS2 130 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 PDE8AO60658 829 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 SASH3O75995 380 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 STARD3NLO95772 234 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 CCDC175P0C221 793 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 WTAPQ15007 396 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 GRAMD1CQ8IYS0 662 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
CTSB-228ENST00000533455 GNAT2P19087 354 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 GPTP24298 496 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 PBX1P40424 430 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 TMTC2Q8N394 836 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 DHX58Q96C10 678 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 MRPL44Q9H9J2 332 aaKnown RBP18.95■□□□□ 0.62
CTSB-228ENST00000533455 SEC31BQ9NQW1 1179 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 AATFQ9NY61 560 aaKnown RBP eCLIP18.95■□□□□ 0.62
CTSB-228ENST00000533455 MYH2Q9UKX2 1941 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 NR5A1Q13285 461 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 SPATA1Q5VX52 437 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 BCL9LQ86UU0 1499 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 CCDC34Q96HJ3 373 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 DESI2Q9BSY9 194 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 CSRNP2Q9H175 543 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 EPC1Q9H2F5 836 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 ARFGAP3Q9NP61 516 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
CTSB-228ENST00000533455 SEMA3EO15041 775 aa18.94■□□□□ 0.62
CTSB-228ENST00000533455 SH3RF1Q7Z6J0 888 aa18.94■□□□□ 0.62
CTSB-228ENST00000533455 PARD6BQ9BYG5 372 aa18.94■□□□□ 0.62
CTSB-228ENST00000533455 TXLNAP40222 546 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 CUL4BQ13620 913 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 KARSQ15046 597 aaKnown RBP18.93■□□□□ 0.62
CTSB-228ENST00000533455 CDKAL1Q5VV42 579 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 CCDC12Q8WUD4 166 aaPredicted RBP18.93■□□□□ 0.62
CTSB-228ENST00000533455 NACAP1Q9BZK3 213 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 ADGRG1Q9Y653 693 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 SYNRGQ9UMZ2 1314 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 ERICH2A1L162 156 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 SLC5A1P13866 664 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 FECHP22830 423 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 OAS2P29728 719 aaKnown RBP18.93■□□□□ 0.62
CTSB-228ENST00000533455 RASGRF1Q13972 1273 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 BRD3Q15059 726 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 USP49Q70CQ1 688 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 ZNF654Q8IZM8 581 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 OXER1Q8TDS5 423 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 FUT8Q9BYC5 575 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 ASAP1Q9ULH1 1129 aa18.93■□□□□ 0.62
CTSB-228ENST00000533455 CCDC151A5D8V7 595 aa18.92■□□□□ 0.62
CTSB-228ENST00000533455 TUBB2AQ13885 445 aa18.92■□□□□ 0.62
CTSB-228ENST00000533455 SMC1AQ14683 1233 aaKnown RBP18.92■□□□□ 0.62
CTSB-228ENST00000533455 MTF1Q14872 753 aa18.92■□□□□ 0.62
CTSB-228ENST00000533455 FANCBQ8NB91 859 aa18.92■□□□□ 0.62
CTSB-228ENST00000533455 TUBB2BQ9BVA1 445 aa18.92■□□□□ 0.62
CTSB-228ENST00000533455 RNF26Q9BY78 433 aaPredicted RBP18.92■□□□□ 0.62
CTSB-228ENST00000533455 RNF41Q9H4P4 317 aaPredicted RBP18.92■□□□□ 0.62
CTSB-228ENST00000533455 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
CTSB-228ENST00000533455 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
CTSB-228ENST00000533455 SOWAHDA6NJG2 315 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 TEX33O43247 280 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 TDO2P48775 406 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 PPP2R5BQ15173 497 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 RAD9BQ6WBX8 426 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 PPFIBP1Q86W92 1011 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 TXLNBQ8N3L3 684 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 PIGBQ92521 554 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 CTAGE1Q96RT6 745 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 DLEC1Q9Y238 1755 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 RTL9Q8NET4 1388 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 ITIH6Q6UXX5 1313 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 TRIM75PA6NK02 468 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms