RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 DZANK1Q9NVP4 752 aa7.19□□□□□ -1.26
C11orf54-212ENST00000533154 PRKAG3Q9UGI9 489 aa7.19□□□□□ -1.26
C11orf54-212ENST00000533154 DIP2CQ9Y2E4 1556 aa7.19□□□□□ -1.26
C11orf54-212ENST00000533154 FANCIQ9NVI1 1328 aa7.19□□□□□ -1.26
C11orf54-212ENST00000533154 F6X3S4 739 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 GRIA4P48058 902 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 NRLP54845 237 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 APOBRQ0VD83 1088 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 MAP3K11Q16584 847 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 COL13A1Q5TAT6 717 aaPredicted RBP7.18□□□□□ -1.26
C11orf54-212ENST00000533154 FAM196AQ6ZSG2 479 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 TRIM42Q8IWZ5 723 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 TRIM55Q9BYV6 548 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 ZNF576Q9H609 170 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 UBP1Q9NZI7 540 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.18□□□□□ -1.26
C11orf54-212ENST00000533154 ABCA6Q8N139 1617 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 TRAPPC8Q9Y2L5 1435 aa7.18□□□□□ -1.26
C11orf54-212ENST00000533154 C3P01024 1663 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 NFKBIEO00221 500 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 U2SURPO15042 1029 aaKnown RBP7.17□□□□□ -1.26
C11orf54-212ENST00000533154 DHX15O43143 795 aaKnown RBP7.17□□□□□ -1.26
C11orf54-212ENST00000533154 CLSTN1O94985 981 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 ETFBP38117 255 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 FAM160A1Q05DH4 1040 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 NFIAQ12857 509 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 RASA3Q14644 834 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 TCEAL1Q15170 157 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 TTBK2Q6IQ55 1244 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 DHX32Q7L7V1 743 aaKnown RBP7.17□□□□□ -1.26
C11orf54-212ENST00000533154 GOLM1Q8NBJ4 401 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 NKD1Q969G9 470 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 SRRTQ9BXP5 876 aaKnown RBP7.17□□□□□ -1.26
C11orf54-212ENST00000533154 SMG9Q9H0W8 520 aaKnown RBP7.17□□□□□ -1.26
C11orf54-212ENST00000533154 TLR6Q9Y2C9 796 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 MRPL42Q9Y6G3 142 aaKnown RBP7.17□□□□□ -1.26
C11orf54-212ENST00000533154 UHRF1BP1Q6BDS2 1440 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 MLH3Q9UHC1 1453 aa7.17□□□□□ -1.26
C11orf54-212ENST00000533154 REREQ9P2R6 1566 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 A0A096LPE4 126 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 A0A1W2PPZ6 126 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 ZBTB42B2RXF5 422 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 ACPPP15309 386 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 TFE3P19532 575 aaPredicted RBP7.16□□□□□ -1.26
C11orf54-212ENST00000533154 GPLD1P80108 840 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 TNNI3KQ59H18 835 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 Q6ZS46 218 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 UBE2Q2Q8WVN8 375 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 NXPE3Q969Y0 559 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 SPACA7Q96KW9 195 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 SEC31BQ9NQW1 1179 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 CLIP1P30622 1438 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 AGLP35573 1532 aa7.16□□□□□ -1.26
C11orf54-212ENST00000533154 KIDINS220Q9ULH0 1771 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 CRKP46108 304 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 HFE2Q6ZVN8 426 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 ABI1Q8IZP0 508 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 TRPM4Q8TD43 1214 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 CPLX3Q8WVH0 158 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 TTC9Q92623 222 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 SHDQ96IW2 340 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 UBL7Q96S82 380 aaPredicted RBP7.15□□□□□ -1.26
C11orf54-212ENST00000533154 SRPK1Q96SB4 655 aaKnown RBP7.15□□□□□ -1.26
C11orf54-212ENST00000533154 KRTAP4-5Q9BYR2 181 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 BRINP2Q9C0B6 783 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 SNTG2Q9NY99 539 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 MRVI1Q9Y6F6 885 aa7.15□□□□□ -1.26
C11orf54-212ENST00000533154 PTPRTO14522 1441 aa7.15□□□□□ -1.27
C11orf54-212ENST00000533154 ABCC1P33527 1531 aa7.15□□□□□ -1.27
C11orf54-212ENST00000533154 PREX2Q70Z35 1606 aa7.15□□□□□ -1.27
C11orf54-212ENST00000533154 ITSN2Q9NZM3 1697 aa7.15□□□□□ -1.27
C11orf54-212ENST00000533154 PRR19A6NJB7 356 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 MPP2Q14168 576 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 SPRED3Q2MJR0 410 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 LTBP4Q8N2S1 1624 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 HNRNPLLQ8WVV9 542 aaKnown RBP7.14□□□□□ -1.27
C11orf54-212ENST00000533154 CASKIN1Q8WXD9 1431 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 DEPDC7Q96QD5 511 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 C7orf69Q9H7B7 122 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 DISP3Q9P2K9 1392 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 MSRB2Q9Y3D2 182 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 R3HCC1Q9Y3T6 440 aaKnown RBP7.14□□□□□ -1.27
C11orf54-212ENST00000533154 SAMM50Q9Y512 469 aa7.14□□□□□ -1.27
C11orf54-212ENST00000533154 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 METTL12A8MUP2 240 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 PDE2AO00408 941 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-212ENST00000533154 EIF2AK2P19525 551 aaKnown RBP7.13□□□□□ -1.27
C11orf54-212ENST00000533154 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 ARMC10Q8N2F6 343 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 OR6P1Q8NGX9 317 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 NSUN5Q96P11 429 aaKnown RBP7.13□□□□□ -1.27
C11orf54-212ENST00000533154 DBNDD2Q9BQY9 259 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 PBX4Q9BYU1 374 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 TMEM39AQ9NV64 488 aa7.13□□□□□ -1.27
C11orf54-212ENST00000533154 GPN3Q9UHW5 284 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-212ENST00000533154 NCOA1Q15788 1441 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 HMX2A2RU54 273 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 PAGE1O75459 146 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms