RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SP3Q02447 781 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 SPP2Q13103 211 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
CPSF1-210ENST00000532935 LRRFIP1Q32MZ4 808 aaKnown RBP18.5■□□□□ 0.55
CPSF1-210ENST00000532935 TATDN1Q6P1N9 297 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 GADL1Q6ZQY3 521 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 APPBP2Q92624 585 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 AS3MTQ9HBK9 375 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 SLC4A4Q9Y6R1 1079 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 GABPAQ06546 454 aa18.49■□□□□ 0.55
CPSF1-210ENST00000532935 OSBP2Q969R2 916 aa18.49■□□□□ 0.55
CPSF1-210ENST00000532935 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
CPSF1-210ENST00000532935 FSD1Q9BTV5 496 aa18.49■□□□□ 0.55
CPSF1-210ENST00000532935 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
CPSF1-210ENST00000532935 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
CPSF1-210ENST00000532935 CYP2D6P10635 497 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 SHMT1P34896 483 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 NUCB1Q02818 461 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 EVX2Q03828 476 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 PKN2Q16513 984 aaKnown RBP18.48■□□□□ 0.55
CPSF1-210ENST00000532935 CERKLQ49MI3 558 aaPredicted RBP18.48■□□□□ 0.55
CPSF1-210ENST00000532935 CHD1LQ86WJ1 897 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 CD99L2Q8TCZ2 262 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 DDRGK1Q96HY6 314 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
CPSF1-210ENST00000532935 WDR18Q9BV38 432 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 MGAMO43451 1857 aa18.48■□□□□ 0.55
CPSF1-210ENST00000532935 HTTP42858 3142 aa18.47■□□□□ 0.55
CPSF1-210ENST00000532935 GH2P01242 217 aa18.47■□□□□ 0.55
CPSF1-210ENST00000532935 HMGCS2P54868 508 aa18.47■□□□□ 0.55
CPSF1-210ENST00000532935 PROCA1Q8NCQ7 364 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-210ENST00000532935 PARK7Q99497 189 aaKnown RBP18.47■□□□□ 0.55
CPSF1-210ENST00000532935 SLC45A1Q9Y2W3 748 aa18.47■□□□□ 0.55
CPSF1-210ENST00000532935 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
CPSF1-210ENST00000532935 M0R2C6 588 aa18.46■□□□□ 0.55
CPSF1-210ENST00000532935 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
CPSF1-210ENST00000532935 AGTPBP1Q9UPW5 1226 aa18.46■□□□□ 0.55
CPSF1-210ENST00000532935 USP17L12C9JPN9 530 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 USP17L21D6R901 530 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 GPAA1O43292 621 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 CYP2C8P10632 490 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 BACE1P56817 501 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 CAP1Q01518 475 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 MTMR2Q13614 643 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 ABCB5Q2M3G0 1257 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 SH3D19Q5HYK7 790 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 C12orf60Q5U649 245 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 C17orf99Q6UX52 265 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 OTOP1Q7RTM1 612 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 EVI5LQ96CN4 794 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 CPA4Q9UI42 421 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 TAOK2Q9UL54 1235 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 CENPFP49454 3210 aa18.45■□□□□ 0.54
CPSF1-210ENST00000532935 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 ZMYM1Q5SVZ6 1142 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 CTR9Q6PD62 1173 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
CPSF1-210ENST00000532935 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 DYNLL2Q96FJ2 89 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 SEC62Q99442 399 aaKnown RBP18.44■□□□□ 0.54
CPSF1-210ENST00000532935 EFCC1Q9HA90 598 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 SWAP70Q9UH65 585 aa18.44■□□□□ 0.54
CPSF1-210ENST00000532935 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 GNAT2P19087 354 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 RAB3GAP1Q15042 981 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 PLEKHM2Q8IWE5 1019 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
CPSF1-210ENST00000532935 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
CPSF1-210ENST00000532935 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
CPSF1-210ENST00000532935 GUCY1A2P33402 732 aa18.42■□□□□ 0.54
CPSF1-210ENST00000532935 LACTBP83111 547 aaPredicted RBP18.42■□□□□ 0.54
CPSF1-210ENST00000532935 PABPC4Q13310 644 aaKnown RBP eCLIP18.42■□□□□ 0.545e-6■□□□□ 10
CPSF1-210ENST00000532935 ARHGEF6Q15052 776 aa18.42■□□□□ 0.54
CPSF1-210ENST00000532935 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
CPSF1-210ENST00000532935 HPS5Q9UPZ3 1129 aa18.42■□□□□ 0.54
CPSF1-210ENST00000532935 MPHOSPH10O00566 681 aaKnown RBP18.41■□□□□ 0.54
CPSF1-210ENST00000532935 BCRP11274 1271 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 CDK8P49336 464 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 KIF22Q14807 665 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 SBK1Q52WX2 424 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 C16orf86Q6ZW13 317 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 SMCR8Q8TEV9 937 aaPredicted RBP18.41■□□□□ 0.54
CPSF1-210ENST00000532935 ARHGAP39Q9C0H5 1083 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
CPSF1-210ENST00000532935 EPB41L4AQ9HCS5 686 aaPredicted RBP18.41■□□□□ 0.54
CPSF1-210ENST00000532935 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
CPSF1-210ENST00000532935 PATL2C9JE40 543 aaKnown RBP18.4■□□□□ 0.54
CPSF1-210ENST00000532935 APPP05067 770 aa18.4■□□□□ 0.54
CPSF1-210ENST00000532935 OSBPP22059 807 aa18.4■□□□□ 0.54
CPSF1-210ENST00000532935 SEPT2Q15019 361 aa18.4■□□□□ 0.54
CPSF1-210ENST00000532935 USP17L2Q6R6M4 530 aa18.4■□□□□ 0.54
CPSF1-210ENST00000532935 FEZ1Q99689 392 aa18.4■□□□□ 0.54
CPSF1-210ENST00000532935 PTPN22Q9Y2R2 807 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms