RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 FAM193BQ96PV7 902 aaPredicted RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 SAMD9LQ8IVG5 1584 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 KRT5P13647 590 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 ABCB5Q2M3G0 1257 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 TTC38Q5R3I4 469 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 LIN9Q5TKA1 542 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CEP135Q66GS9 1140 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CIAPIN1Q6FI81 312 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 NT5C3AQ9H0P0 336 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 USP25Q9UHP3 1055 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
COLCA1-203ENST00000532918 DDX39AO00148 427 aaKnown RBP11.99□□□□□ -0.49
COLCA1-203ENST00000532918 TMOD1P28289 359 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CTDSPL2Q05D32 466 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 MIER3Q7Z3K6 550 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 KRT26Q7Z3Y9 468 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 GABPB2Q8TAK5 448 aaPredicted RBP11.99□□□□□ -0.49
COLCA1-203ENST00000532918 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
COLCA1-203ENST00000532918 FLOT1O75955 427 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CALCRLQ16602 461 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC129Q6ZRS4 1044 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 IL17REQ8NFR9 667 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 ASAP1Q9ULH1 1129 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CETN3O15182 167 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 GAS7O60861 476 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 ATP2A2P16615 1042 aaKnown RBP11.99□□□□□ -0.49
COLCA1-203ENST00000532918 GJC1P36383 396 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 GYG1P46976 350 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 BRINP3Q76B58 766 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 MASTLQ96GX5 879 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
COLCA1-203ENST00000532918 NDC80O14777 642 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 KLHL40Q2TBA0 621 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 SNX29Q8TEQ0 813 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 CD2APQ9Y5K6 639 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 ARL1P40616 181 aaPredicted RBP11.98□□□□□ -0.49
COLCA1-203ENST00000532918 UBXN1Q04323 297 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 KIF5AQ12840 1032 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 CDC37L1Q7L3B6 337 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 KDM3AQ9Y4C1 1321 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 KRT86O43790 486 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 ADPGKQ9BRR6 497 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 ATF7P17544 494 aaPredicted RBP11.98□□□□□ -0.49
COLCA1-203ENST00000532918 DAAM2Q86T65 1068 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 PLIN2Q99541 437 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 NRBP2Q9NSY0 501 aa11.98□□□□□ -0.49
COLCA1-203ENST00000532918 ADD3Q9UEY8 706 aaKnown RBP11.98□□□□□ -0.49
COLCA1-203ENST00000532918 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 USP17L21D6R901 530 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 CIAO1O76071 339 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 ADRA2BP18089 450 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 FBXO11Q86XK2 927 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 CSRNP2Q9H175 543 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 DACT1Q9NYF0 836 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 PRPF6O94906 941 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 SLU7O95391 586 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 SLC27A3Q5K4L6 730 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 C2orf69Q8N8R5 385 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 FAM200AQ8TCP9 573 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 NSMCE1Q8WV22 266 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 KDM5AP29375 1690 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 USP6P35125 1406 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 SPATA31A3Q5VYP0 1347 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 POLR3GO15318 223 aaPredicted RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 TUBB4AP04350 444 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 TXNDC16Q9P2K2 825 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 SETSIPP0DME0 302 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 DNM1Q05193 864 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 BIRC2Q13490 618 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 PAIP2Q9BPZ3 127 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 DHX36Q9H2U1 1008 aaKnown RBP11.97□□□□□ -0.49
COLCA1-203ENST00000532918 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 ERBB3P21860 1342 aa11.97□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC175P0C221 793 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 ARID5AQ03989 594 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 DIS3L2Q8IYB7 885 aaKnown RBP11.96□□□□□ -0.49
COLCA1-203ENST00000532918 MYCT1Q8N699 235 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 JPH2Q9BR39 696 aaPredicted RBP11.96□□□□□ -0.49
COLCA1-203ENST00000532918 MTUS1Q9ULD2 1270 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 FAM169AQ9Y6X4 670 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 ADCY5O95622 1261 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 FOSP01100 380 aaPredicted RBP11.96□□□□□ -0.49
COLCA1-203ENST00000532918 RAPGEF1Q13905 1077 aa11.96□□□□□ -0.49
COLCA1-203ENST00000532918 SLFN12Q8IYM2 578 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms