RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 DYNLL1P63167 89 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 MYL5Q02045 173 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 PDE4BQ07343 736 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 SAFBQ15424 915 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 ZRSR1Q15695 479 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 ISM2Q6H9L7 571 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 ESR2Q92731 530 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 DPF2Q92785 391 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 CELF1Q92879 486 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 CCDC94Q9BW85 323 aaPredicted RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 ABCF2Q9UG63 623 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 SRPRBQ9Y5M8 271 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 IRS2Q9Y4H2 1338 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 CYP2D7A0A087X1C5 515 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 SEMA3EO15041 775 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 PRPF3O43395 683 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 PCP11498 1178 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 KLRK1P26718 216 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 TPM4P67936 248 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 TROAPQ12815 778 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 NPY5RQ15761 445 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 SPECC1Q5M775 1068 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 CNNM3Q8NE01 707 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 SPATA20Q8TB22 786 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 NSUN4Q96CB9 384 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 UBAC1Q9BSL1 405 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 PHF20Q9BVI0 1012 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 TMX1Q9H3N1 280 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 TOMM22Q9NS69 142 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 INTS13Q9NVM9 706 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 GNL3LQ9NVN8 582 aaKnown RBP9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 RAI14Q9P0K7 980 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 MAN1B1Q9UKM7 699 aa9.53□□□□□ -0.88
TRIM53BP-201ENST00000532912 MYH13Q9UKX3 1938 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 PSDA5PKW4 1024 aaPredicted RBP9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 MINDY4BA8MYZ0 360 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 MORC3Q14149 939 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 DHX8Q14562 1220 aaKnown RBP9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 PTPN14Q15678 1187 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 GLIPR1L2Q4G1C9 344 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 EARS2Q5JPH6 523 aaKnown RBP9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 TBC1D9BQ66K14 1250 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 CTR9Q6PD62 1173 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 VSTM4Q8IW00 320 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 NUP133Q8WUM0 1156 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 MED15Q96RN5 788 aa9.52□□□□□ -0.89
TRIM53BP-201ENST00000532912 A0A0G2JS52 829 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 ORC4O43929 436 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 DDAH1O94760 285 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 PLEKHA8P1O95397 391 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 ZNF18P17022 549 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 EVX2Q03828 476 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 POSTNQ15063 836 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CAVIN4Q5BKX8 364 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 TMTC3Q6ZXV5 915 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 PPP1R13BQ96KQ4 1090 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 AATFQ9NY61 560 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 A0A087X0B3 334 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 WNT7AO00755 349 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 SOCS7O14512 581 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 SFPQP23246 707 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 UBASH3AP57075 661 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 MECOMQ03112 1051 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 FMR1Q06787 632 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 TBX2Q13207 712 aaPredicted RBP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 USP49Q70CQ1 688 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 TMEM139Q8IV31 216 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 TRIML1Q8N9V2 468 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CCDC112Q8NEF3 446 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 NOL10Q9BSC4 688 aaKnown RBP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CSRNP2Q9H175 543 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CABP5Q9NP86 173 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 RBM28Q9NW13 759 aaKnown RBP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 FANCLQ9NW38 375 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 TRMT1Q9NXH9 659 aaKnown RBP9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 VPS54Q9P1Q0 977 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 NARFQ9UHQ1 456 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 CEP131Q9UPN4 1083 aa9.51□□□□□ -0.89
TRIM53BP-201ENST00000532912 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
TRIM53BP-201ENST00000532912 TMEM232C9JQI7 657 aa9.5□□□□□ -0.89
TRIM53BP-201ENST00000532912 USP17L21D6R901 530 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms