RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 FBXO33Q7Z6M2 555 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 NKX2-3Q8TAU0 364 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 TIAM2Q8IVF5 1701 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 NPHP1O15259 732 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 FAM193AP78312 1265 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 GNL2Q13823 731 aaKnown RBP20.61■□□□□ 0.89
UBXN1-213ENST00000532904 NFIXQ14938 502 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 CFAP100Q494V2 611 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 METTL16Q86W50 562 aaKnown RBP20.61■□□□□ 0.89
UBXN1-213ENST00000532904 ELOA2Q8IYF1 753 aaPredicted RBP20.61■□□□□ 0.89
UBXN1-213ENST00000532904 TMEM87BQ96K49 555 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 DNAI1Q9UI46 699 aa20.61■□□□□ 0.89
UBXN1-213ENST00000532904 MBD4O95243 580 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 NTRK3Q16288 839 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 KRBA2Q6ZNG9 492 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 REXO1L1PQ8IX06 675 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 FAM84BQ96KN1 310 aaPredicted RBP20.6■□□□□ 0.89
UBXN1-213ENST00000532904 LRP2BPQ9P2M1 347 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 APPP05067 770 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 GYG1P46976 350 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 TAF3Q5VWG9 929 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 PHKBQ93100 1093 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 CLIC6Q96NY7 704 aa20.6■□□□□ 0.89
UBXN1-213ENST00000532904 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.6■□□□□ 0.89
UBXN1-213ENST00000532904 SRRTQ9BXP5 876 aaKnown RBP20.6■□□□□ 0.89
UBXN1-213ENST00000532904 ECM29Q5VYK3 1845 aa20.59■□□□□ 0.89
UBXN1-213ENST00000532904 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
UBXN1-213ENST00000532904 CLCN6P51797 869 aa20.59■□□□□ 0.89
UBXN1-213ENST00000532904 TMED8Q6PL24 325 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-213ENST00000532904 IFNL3Q8IZI9 196 aa20.59■□□□□ 0.89
UBXN1-213ENST00000532904 IGDCC4Q8TDY8 1250 aa20.59■□□□□ 0.89
UBXN1-213ENST00000532904 COL1A1P02452 1464 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-213ENST00000532904 CACNA1SQ13698 1873 aa20.59■□□□□ 0.89
UBXN1-213ENST00000532904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
UBXN1-213ENST00000532904 ZBTB43O43298 467 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 RXRAP19793 462 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 IARSP41252 1262 aaKnown RBP20.58■□□□□ 0.89
UBXN1-213ENST00000532904 TRIM29Q14134 588 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 LONRF3Q496Y0 759 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 ARHGAP29Q52LW3 1261 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 FOXP4Q8IVH2 680 aaPredicted RBP20.58■□□□□ 0.89
UBXN1-213ENST00000532904 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 FANCLQ9NW38 375 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 KCNH3Q9ULD8 1083 aa20.58■□□□□ 0.89
UBXN1-213ENST00000532904 TMEM232C9JQI7 657 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 ZSCAN12O43309 604 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 RANBP6O60518 1105 aaKnown RBP20.58■□□□□ 0.88
UBXN1-213ENST00000532904 SGMS1Q86VZ5 419 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 TMEM139Q8IV31 216 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 CNBD1Q8NA66 436 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 CNNM3Q8NE01 707 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 NACAP1Q9BZK3 213 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 EPB41L4AQ9HCS5 686 aaPredicted RBP20.58■□□□□ 0.88
UBXN1-213ENST00000532904 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.88
UBXN1-213ENST00000532904 PCDHA5Q9Y5H7 936 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 FHOD1Q9Y613 1164 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 STK36Q9NRP7 1315 aa20.58■□□□□ 0.88
UBXN1-213ENST00000532904 GSG1L2A8MUP6 293 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 B4E1Z4 1266 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 CREBRFQ8IUR6 639 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 NAPBQ9H115 298 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 ARMT1Q9H993 441 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 LY9Q9HBG7 655 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 GOLGA8AA7E2F4 631 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 ARHGAP6O43182 974 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 MDM2Q00987 491 aaPredicted RBP20.57■□□□□ 0.88
UBXN1-213ENST00000532904 TBX2Q13207 712 aaPredicted RBP20.57■□□□□ 0.88
UBXN1-213ENST00000532904 INTS13Q9NVM9 706 aa20.57■□□□□ 0.88
UBXN1-213ENST00000532904 FANCGO15287 622 aa20.56■□□□□ 0.88
UBXN1-213ENST00000532904 KRI1Q8N9T8 703 aaKnown RBP20.56■□□□□ 0.88
UBXN1-213ENST00000532904 UBXN4Q92575 508 aa20.56■□□□□ 0.88
UBXN1-213ENST00000532904 TADA3O75528 432 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 BMP6P22004 513 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 CYP7A1P22680 504 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 PDE4BQ07343 736 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 GRAPQ13588 217 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 NFXL1Q6ZNB6 911 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 LCORLQ8N3X6 602 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 GRAPLQ8TC17 118 aaPredicted RBP20.55■□□□□ 0.88
UBXN1-213ENST00000532904 CNNM2Q9H8M5 875 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 VWA3AA6NCI4 1184 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 WTIPA6NIX2 430 aaPredicted RBP20.55■□□□□ 0.88
UBXN1-213ENST00000532904 ZRANB2O95218 330 aaKnown RBP eCLIP20.55■□□□□ 0.88
UBXN1-213ENST00000532904 GYS1P13807 737 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 LIFRP42702 1097 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 MNS1Q8NEH6 495 aa20.55■□□□□ 0.88
UBXN1-213ENST00000532904 ARGLU1Q9NWB6 273 aaPredicted RBP20.55■□□□□ 0.88
UBXN1-213ENST00000532904 HOOK1Q9UJC3 728 aaKnown RBP20.55■□□□□ 0.88
UBXN1-213ENST00000532904 MAST2Q6P0Q8 1798 aa20.54■□□□□ 0.88
UBXN1-213ENST00000532904 URI1O94763 535 aaPredicted RBP20.54■□□□□ 0.88
UBXN1-213ENST00000532904 FMNL1O95466 1100 aaPredicted RBP20.54■□□□□ 0.88
UBXN1-213ENST00000532904 PNMA6AP0CW24 399 aaPredicted RBP20.54■□□□□ 0.88
UBXN1-213ENST00000532904 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
UBXN1-213ENST00000532904 SSRP1Q08945 709 aaKnown RBP20.54■□□□□ 0.88
UBXN1-213ENST00000532904 GOLGA8FQ08AF8 430 aa20.54■□□□□ 0.88
UBXN1-213ENST00000532904 GOLGA8DPQ0D2H9 430 aa20.54■□□□□ 0.88
UBXN1-213ENST00000532904 TMEM67Q5HYA8 995 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms