RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 MAPK4P31152 587 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 JAG1P78504 1218 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 CCL14Q16627 93 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 CCAR1Q8IX12 1150 aaKnown RBP17.83■□□□□ 0.44
CDC27-209ENST00000532893 TRMT44Q8IYL2 757 aaKnown RBP17.83■□□□□ 0.44
CDC27-209ENST00000532893 SPATA5Q8NB90 893 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 USP6NLQ92738 828 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 PI4KBQ9UBF8 816 aa17.83■□□□□ 0.44
CDC27-209ENST00000532893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
CDC27-209ENST00000532893 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
CDC27-209ENST00000532893 GORABQ5T7V8 394 aa17.82■□□□□ 0.44
CDC27-209ENST00000532893 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDC27-209ENST00000532893 SH3RF3Q8TEJ3 882 aaPredicted RBP17.82■□□□□ 0.44
CDC27-209ENST00000532893 PORCNQ9H237 461 aa17.82■□□□□ 0.44
CDC27-209ENST00000532893 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
CDC27-209ENST00000532893 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
CDC27-209ENST00000532893 LOC285556D6RIA3 1793 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 C19orf81C9J6K1 198 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 ASNSP08243 561 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 RGS2P41220 211 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 ERVK-9P63128 1117 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 ERVK-24P63145 666 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 SLFN5Q08AF3 891 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 SHROOM1Q2M3G4 852 aaPredicted RBP17.81■□□□□ 0.44
CDC27-209ENST00000532893 MORN1Q5T089 497 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 GPR142Q7Z601 462 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 PLEKHH3Q7Z736 793 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 FAM161BQ96MY7 647 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 MEIS3Q99687 375 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 PAGR1Q9BTK6 254 aa17.81■□□□□ 0.44
CDC27-209ENST00000532893 COL2A1P02458 1487 aaPredicted RBP17.81■□□□□ 0.44
CDC27-209ENST00000532893 USP17L10C9JJH3 530 aa17.8■□□□□ 0.44
CDC27-209ENST00000532893 FAM109BQ6ICB4 259 aaPredicted RBP17.8■□□□□ 0.44
CDC27-209ENST00000532893 POTEEQ6S8J3 1075 aa17.8■□□□□ 0.44
CDC27-209ENST00000532893 GUCD1Q96NT3 240 aa17.8■□□□□ 0.44
CDC27-209ENST00000532893 SENP6Q9GZR1 1112 aaPredicted RBP17.8■□□□□ 0.44
CDC27-209ENST00000532893 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
CDC27-209ENST00000532893 LRP2BPQ9P2M1 347 aa17.8■□□□□ 0.44
CDC27-209ENST00000532893 SRGAP3O43295 1099 aa17.79■□□□□ 0.44
CDC27-209ENST00000532893 GDF11O95390 407 aa17.79■□□□□ 0.44
CDC27-209ENST00000532893 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
CDC27-209ENST00000532893 LBHD1Q9BQE6 289 aaPredicted RBP17.79■□□□□ 0.44
CDC27-209ENST00000532893 NOL10Q9BSC4 688 aaKnown RBP17.79■□□□□ 0.44
CDC27-209ENST00000532893 DNAJC18Q9H819 358 aa17.79■□□□□ 0.44
CDC27-209ENST00000532893 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
CDC27-209ENST00000532893 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
CDC27-209ENST00000532893 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
CDC27-209ENST00000532893 CDCA7LQ96GN5 454 aa17.78■□□□□ 0.44
CDC27-209ENST00000532893 APBA2Q99767 749 aa17.78■□□□□ 0.44
CDC27-209ENST00000532893 TRIM34Q9BYJ4 488 aa17.78■□□□□ 0.44
CDC27-209ENST00000532893 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
CDC27-209ENST00000532893 EMILIN3Q9NT22 766 aa17.78■□□□□ 0.44
CDC27-209ENST00000532893 AATFQ9NY61 560 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDC27-209ENST00000532893 BAG3O95817 575 aa17.77■□□□□ 0.44
CDC27-209ENST00000532893 ARID4AP29374 1257 aaPredicted RBP17.77■□□□□ 0.44
CDC27-209ENST00000532893 MCAMP43121 646 aa17.77■□□□□ 0.44
CDC27-209ENST00000532893 EDC3Q96F86 508 aaKnown RBP17.77■□□□□ 0.44
CDC27-209ENST00000532893 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
CDC27-209ENST00000532893 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
CDC27-209ENST00000532893 NDUFB9Q9Y6M9 179 aa17.77■□□□□ 0.44
CDC27-209ENST00000532893 ATAD5Q96QE3 1844 aa17.77■□□□□ 0.43
CDC27-209ENST00000532893 ATN1P54259 1190 aaPredicted RBP17.76■□□□□ 0.43
CDC27-209ENST00000532893 MAP2K5Q13163 448 aa17.76■□□□□ 0.43
CDC27-209ENST00000532893 MFSD14CQ5VZR4 134 aa17.76■□□□□ 0.43
CDC27-209ENST00000532893 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
CDC27-209ENST00000532893 METTL16Q86W50 562 aaKnown RBP17.76■□□□□ 0.43
CDC27-209ENST00000532893 GTF3C2Q8WUA4 911 aaPredicted RBP17.76■□□□□ 0.43
CDC27-209ENST00000532893 SNRKQ9NRH2 765 aa17.76■□□□□ 0.43
CDC27-209ENST00000532893 FLRT1Q9NZU1 646 aa17.76■□□□□ 0.43
CDC27-209ENST00000532893 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
CDC27-209ENST00000532893 PLCG2P16885 1265 aa17.75■□□□□ 0.43
CDC27-209ENST00000532893 CNGA1P29973 690 aa17.75■□□□□ 0.43
CDC27-209ENST00000532893 WDR78Q5VTH9 848 aa17.75■□□□□ 0.43
CDC27-209ENST00000532893 USP17L2Q6R6M4 530 aa17.75■□□□□ 0.43
CDC27-209ENST00000532893 GINM1Q9NU53 330 aa17.75■□□□□ 0.43
CDC27-209ENST00000532893 SAP30BPQ9UHR5 308 aaKnown RBP17.75■□□□□ 0.43
CDC27-209ENST00000532893 RABGAP1Q9Y3P9 1069 aa17.75■□□□□ 0.43
CDC27-209ENST00000532893 VCANP13611 3396 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 FLT1P17948 1338 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 CNMDO75829 334 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 GNAI3P08754 354 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 UQCRFS1P1P0C7P4 283 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 PPP4CP60510 307 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 MTX1Q13505 466 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 ZYXQ15942 572 aaKnown RBP17.74■□□□□ 0.43
CDC27-209ENST00000532893 ZNF697Q5TEC3 545 aa17.74■□□□□ 0.43
CDC27-209ENST00000532893 PRUNE2Q8WUY3 3088 aa17.73■□□□□ 0.43
CDC27-209ENST00000532893 GLRX3O76003 335 aaKnown RBP17.73■□□□□ 0.43
CDC27-209ENST00000532893 CCNA1P78396 465 aa17.73■□□□□ 0.43
CDC27-209ENST00000532893 ATP2B2Q01814 1243 aa17.73■□□□□ 0.43
CDC27-209ENST00000532893 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
CDC27-209ENST00000532893 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
CDC27-209ENST00000532893 PRKAG2Q9UGJ0 569 aa17.73■□□□□ 0.43
CDC27-209ENST00000532893 DDX20Q9UHI6 824 aaKnown RBP17.73■□□□□ 0.43
CDC27-209ENST00000532893 EYSQ5T1H1 3165 aa17.73■□□□□ 0.43
CDC27-209ENST00000532893 SLC15A5A6NIM6 579 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L15C9J2P7 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L13C9JLJ4 530 aa17.72■□□□□ 0.43
CDC27-209ENST00000532893 USP17L11C9JVI0 530 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms