RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	AS3MT	Q9HBK9	375 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	DDX4	Q9NQI0	724 aa	Known RBP	11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	SLC45A1	Q9Y2W3	748 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	AFG3L2	Q9Y4W6	797 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	COL2A1	P02458	1487 aa	Predicted RBP	11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	LOC285556	D6RIA3	1793 aa		11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TNPO2	O14787	897 aa	Known RBP	11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	SURF6	O75683	361 aa	Known RBP	11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	MCAM	P43121	646 aa		11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PI16	Q6UXB8	463 aa		11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	SH3BP5L	Q7L8J4	393 aa		11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	KCTD12	Q96CX2	325 aa	Known RBP	11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ADGRA2	Q96PE1	1338 aa		11.8	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ARHGAP33	O14559	1287 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	BCR	P11274	1271 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	RHBDL3	P58872	404 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	MAP3K10	Q02779	954 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PRKCZ	Q05513	592 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	MOGS	Q13724	837 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TNNI3K	Q59H18	835 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	GPAT2	Q6NUI2	795 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	COA7	Q96BR5	231 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	RNF208	Q9H0X6	261 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	DHX36	Q9H2U1	1008 aa	Known RBP	11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	GPR108	Q9NPR9	543 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	HERC5	Q9UII4	1024 aa	Known RBP	11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TAOK2	Q9UL54	1235 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	AGTPBP1	Q9UPW5	1226 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TNN	Q9UQP3	1299 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	FPGT-TNNI3K	V9GXZ4	949 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	MYH1	P12882	1939 aa		11.79	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TNRC18	O15417	2968 aa	Predicted RBP	11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	FAM196B	A6NMK8	535 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	CTGF	P29279	349 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ATP8B2	P98198	1209 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	DMRTA1	Q5VZB9	504 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ZNF280C	Q8ND82	737 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	HTATIP2	Q9BUP3	242 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	SNRK	Q9NRH2	765 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PI4KB	Q9UBF8	816 aa		11.78	□□□□□ -0.52
PPFIA1-223	ENST00000532793	USP17L5	A8MUK1	530 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ADCY3	O60266	1144 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	IGSF3	O75054	1194 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	HLA-DOA	P06340	250 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CCL5	P13501	91 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CAP2	P40123	477 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	SPP2	Q13103	211 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	MTFR1	Q15390	333 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	HABP4	Q5JVS0	413 aa	Known RBP	11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CCDC84	Q86UT8	332 aa	Predicted RBP	11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ANKRD13C	Q8N6S4	541 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	SSH3	Q8TE77	659 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	DPF3	Q92784	378 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	DBNDD2	Q9BQY9	259 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	C1orf115	Q9H7X2	142 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	TMOD4	Q9NZQ9	345 aa		11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.77	□□□□□ -0.53
PPFIA1-223	ENST00000532793	GJB1	P08034	283 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ASNS	P08243	561 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	SLURP2	P0DP57	97 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	GCLC	P48506	637 aa	Predicted RBP	11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	FLT3LG	P49771	235 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	HMGCS2	P54868	508 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	IRX3	P78415	501 aa	Predicted RBP	11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	FAM110C	Q1W6H9	321 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CERS3	Q8IU89	383 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	MAPKAPK5	Q8IW41	473 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ZNF384	Q8TF68	577 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	TGFBRAP1	Q8WUH2	860 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	SIPA1L1	O43166	1804 aa		11.76	□□□□□ -0.53
PPFIA1-223	ENST00000532793	TK2	O00142	265 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	IDH1	O75874	414 aa	Known RBP	11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	GJA8	P48165	433 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	TREML2	Q5T2D2	321 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ERC1	Q8IUD2	1116 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CCAR1	Q8IX12	1150 aa	Known RBP	11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	PXYLP1	Q8TE99	480 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	GABRQ	Q9UN88	632 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	PCDHGA4	Q9Y5G9	962 aa		11.75	□□□□□ -0.53
PPFIA1-223	ENST00000532793	DOCK3	Q8IZD9	2030 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	MS4A1	P11836	297 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CAPN2	P17655	700 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CYP7A1	P22680	504 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	ZAP70	P43403	619 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	USP5	P45974	858 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	IRF5	Q13568	498 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	HSP90AB4P	Q58FF6	505 aa		11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	U2AF1L4	Q8WU68	220 aa	Known RBP	11.74	□□□□□ -0.53
PPFIA1-223	ENST00000532793	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.74	□□□□□ -0.53

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