RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 SLC45A1Q9Y2W3 748 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 AFG3L2Q9Y4W6 797 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 COL2A1P02458 1487 aaPredicted RBP11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 MYO5AQ9Y4I1 1855 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 LOC285556D6RIA3 1793 aa11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 MCAMP43121 646 aa11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 SH3BP5LQ7L8J4 393 aa11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
PPFIA1-223ENST00000532793 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 BCRP11274 1271 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 RHBDL3P58872 404 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 PRKCZQ05513 592 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 MOGSQ13724 837 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 TNNI3KQ59H18 835 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 GPAT2Q6NUI2 795 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 CRACR2BQ8N4Y2 399 aaPredicted RBP11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 COA7Q96BR5 231 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 AGTPBP1Q9UPW5 1226 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 MYH1P12882 1939 aa11.79□□□□□ -0.52
PPFIA1-223ENST00000532793 TNRC18O15417 2968 aaPredicted RBP11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 CTGFP29279 349 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 DMRTA1Q5VZB9 504 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 ZNF280CQ8ND82 737 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 HTATIP2Q9BUP3 242 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
PPFIA1-223ENST00000532793 USP17L5A8MUK1 530 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 ADCY3O60266 1144 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 IGSF3O75054 1194 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 HLA-DOAP06340 250 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 CCL5P13501 91 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 CAP2P40123 477 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 SPP2Q13103 211 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 MTFR1Q15390 333 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 HABP4Q5JVS0 413 aaKnown RBP11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 SH3RF3Q8TEJ3 882 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 DPF3Q92784 378 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-223ENST00000532793 GJB1P08034 283 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 ASNSP08243 561 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 GCLCP48506 637 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 FLT3LGP49771 235 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 HMGCS2P54868 508 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 IRX3P78415 501 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 FAM110CQ1W6H9 321 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 CERS3Q8IU89 383 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 ZNF384Q8TF68 577 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
PPFIA1-223ENST00000532793 TK2O00142 265 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 IDH1O75874 414 aaKnown RBP11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 GJA8P48165 433 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 ZNF512BQ96KM6 892 aaPredicted RBP11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 GABRQQ9UN88 632 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
PPFIA1-223ENST00000532793 DOCK3Q8IZD9 2030 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 MS4A1P11836 297 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 CAPN2P17655 700 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 CYP7A1P22680 504 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 ZAP70P43403 619 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 USP5P45974 858 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 IRF5Q13568 498 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 U2AF1L4Q8WU68 220 aaKnown RBP11.74□□□□□ -0.53
PPFIA1-223ENST00000532793 CCDC8Q9H0W5 538 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms