RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 KCNG1Q9UIX4 513 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 BTDP43251 543 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 IRX3P78415 501 aaPredicted RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 KRT25Q7Z3Z0 450 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 PRIMPOLQ96LW4 560 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 NSRP1Q9H0G5 558 aaKnown RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 KRT5P13647 590 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 ATP5JP18859 108 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 PTH1RQ03431 593 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 PDE4DQ08499 809 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 EAF2Q96CJ1 260 aaPredicted RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 RRP9O43818 475 aaKnown RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 POLR2DO15514 142 aaKnown RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 DIS3L2Q8IYB7 885 aaKnown RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 ARAP3Q8WWN8 1544 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 PCCAP05165 728 aaPredicted RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 ATP2B4P23634 1241 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 DNAI1Q9UI46 699 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 ANO1Q5XXA6 986 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 DYMQ7RTS9 669 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 CNGA4Q8IV77 575 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 ZNF526Q8TF50 670 aaPredicted RBP16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 NOX5Q96PH1 765 aa16.54■□□□□ 0.24
PCDHA9-202ENST00000532602 KARSQ15046 597 aaKnown RBP16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 GADL1Q6ZQY3 521 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 ABCC4O15439 1325 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 SYNMO15061 1565 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 DNM2P50570 870 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 GOLGA1Q92805 767 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 TTC14Q96N46 770 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 PHKA1P46020 1223 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 TRPC3Q13507 836 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 WDR17Q8IZU2 1322 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 CBX1P83916 185 aa16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 TRIM6Q9C030 488 aaPredicted RBP16.53■□□□□ 0.24
PCDHA9-202ENST00000532602 GAS8O95995 478 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 CAPZA3Q96KX2 299 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 DBNDD1Q9H9R9 158 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 AS3MTQ9HBK9 375 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 CSADQ9Y600 493 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 ATP7BP35670 1465 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 SMCR8Q8TEV9 937 aaPredicted RBP16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.24
PCDHA9-202ENST00000532602 M0QZ92 97 aa16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 IFNL3Q8IZI9 196 aa16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 FAM169AQ9Y6X4 670 aa16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 SERPINB2P05120 415 aa16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 GSPT1P15170 499 aaKnown RBP16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 ZNF804BA4D1E1 1349 aa16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 GPR101Q96P66 508 aaPredicted RBP16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 MAK16Q9BXY0 300 aaKnown RBP16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 CSRNP2Q9H175 543 aa16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 MTRF1LQ9UGC7 380 aaKnown RBP16.52■□□□□ 0.23
PCDHA9-202ENST00000532602 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 ARID4AP29374 1257 aaPredicted RBP16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 MYL5Q02045 173 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 SPC25Q9HBM1 224 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 CETN3O15182 167 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 CALUO43852 315 aaPredicted RBP16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 STAMQ92783 540 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 ARFGAP3Q9NP61 516 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 OPA1O60313 960 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 FBF1Q8TES7 1133 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 CALCRLQ16602 461 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 BRINP3Q76B58 766 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 ABCC3O15438 1527 aa16.51■□□□□ 0.23
PCDHA9-202ENST00000532602 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 UNC5CLQ8IV45 518 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 VPS16Q9H269 839 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 PNMA2Q9UL42 364 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 CALCOCO2Q13137 446 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 HACE1Q8IYU2 909 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 PDE6AP16499 860 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 SNX29Q8TEQ0 813 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 PIGBQ92521 554 aa16.5■□□□□ 0.23
PCDHA9-202ENST00000532602 TNNC1P63316 161 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms