RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 PLIN2Q99541 437 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 PUS3Q9BZE2 481 aaKnown RBP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 CGNQ9P2M7 1197 aaKnown RBP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 SV2BQ7L1I2 683 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 JADE2Q9NQC1 790 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 PDE4DQ08499 809 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 ZMYM4Q5VZL5 1548 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
PTPRK-221ENST00000532331 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
PTPRK-221ENST00000532331 C8orf34Q49A92 452 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 SSH3Q8TE77 659 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 FNBP1Q96RU3 617 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 PLEKHF1Q96S99 279 aa12.71□□□□□ -0.37
PTPRK-221ENST00000532331 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
PTPRK-221ENST00000532331 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.38
PTPRK-221ENST00000532331 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.38
PTPRK-221ENST00000532331 NCAPD2Q15021 1401 aa12.71□□□□□ -0.38
PTPRK-221ENST00000532331 SPECC1Q5M775 1068 aa12.71□□□□□ -0.38
PTPRK-221ENST00000532331 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.38
PTPRK-221ENST00000532331 DSCC1Q9BVC3 393 aa12.71□□□□□ -0.38
PTPRK-221ENST00000532331 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 PLCD1P51178 756 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 GNG11P61952 73 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 PLVAPQ9BX97 442 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 SLFN13Q68D06 897 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
PTPRK-221ENST00000532331 BSDC1Q9NW68 430 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-221ENST00000532331 VWA3AA6NCI4 1184 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 ARID4AP29374 1257 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-221ENST00000532331 TXKP42681 527 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 EXOC7Q9UPT5 735 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 SPATA31A1Q5TZJ5 1347 aa12.7□□□□□ -0.38
PTPRK-221ENST00000532331 POLR2MP0CAP2 368 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 ACTN2P35609 894 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 FRMPD2Q68DX3 1309 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 BICDL2A1A5D9 508 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 DHX36Q9H2U1 1008 aaKnown RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 BCCIPQ9P287 314 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 TMEM232C9JQI7 657 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 BMS1Q14692 1282 aaKnown RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 MCTP2Q6DN12 878 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 MYL10Q9BUA6 226 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 CEP83Q9Y592 693 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 RIMS1Q86UR5 1692 aaKnown RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 FBXO11Q86XK2 927 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 ZSCAN10Q96SZ4 725 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 DIP2CQ9Y2E4 1556 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 BIRC3Q13489 604 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
PTPRK-221ENST00000532331 CEP135Q66GS9 1140 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 FRMD4BQ9Y2L6 1034 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
PTPRK-221ENST00000532331 EP400NLQ6ZTU2 488 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 EAF2Q96CJ1 260 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-221ENST00000532331 PLCD4Q9BRC7 762 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 ABCC4O15439 1325 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 SLC8A3P57103 927 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 TBC1D10BQ4KMP7 808 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-221ENST00000532331 REXO1Q8N1G1 1221 aaKnown RBP12.68□□□□□ -0.38
PTPRK-221ENST00000532331 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 HAUS7Q99871 368 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 AP5M1Q9H0R1 490 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 GPR108Q9NPR9 543 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 COMMD10Q9Y6G5 202 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 ADORA1P30542 326 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 EDC3Q96F86 508 aaKnown RBP12.68□□□□□ -0.38
PTPRK-221ENST00000532331 PABPN1LA6NDY0 278 aaKnown RBP12.68□□□□□ -0.38
PTPRK-221ENST00000532331 SGSM2O43147 1006 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 ARHGEF40Q8TER5 1519 aa12.68□□□□□ -0.38
PTPRK-221ENST00000532331 GOLGA6L10A0A0M3HER8 536 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 KIAA0753Q2KHM9 967 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms