RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, human

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-222	ENST00000532285	SLC45A1	Q9Y2W3	748 aa		27.67	■■■□□ 2.02
CAPN1-222	ENST00000532285	PRKAB2	O43741	272 aa		27.66	■■■□□ 2.02
CAPN1-222	ENST00000532285	GDF11	O95390	407 aa		27.66	■■■□□ 2.02
CAPN1-222	ENST00000532285	JAG1	P78504	1218 aa		27.66	■■■□□ 2.02
CAPN1-222	ENST00000532285	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.66	■■■□□ 2.02
CAPN1-222	ENST00000532285	PARK7	Q99497	189 aa	Known RBP	27.66	■■■□□ 2.02
CAPN1-222	ENST00000532285	ZBTB21	Q9ULJ3	1066 aa		27.66	■■■□□ 2.02
CAPN1-222	ENST00000532285	CCDC85C	A6NKD9	419 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	ARHGEF6	Q15052	776 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	FBXO46	Q6PJ61	603 aa	Predicted RBP	27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	OTOP1	Q7RTM1	612 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	DDRGK1	Q96HY6	314 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	STAP2	Q9UGK3	403 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	TRIM17	Q9Y577	477 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	SLC4A4	Q9Y6R1	1079 aa		27.65	■■■□□ 2.02
CAPN1-222	ENST00000532285	IGHD	P01880	384 aa		27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	GABPA	Q06546	454 aa		27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	CERKL	Q49MI3	558 aa	Predicted RBP	27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	C17orf99	Q6UX52	265 aa		27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	APPBP2	Q92624	585 aa		27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	TAOK2	Q9UL54	1235 aa		27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	AGTPBP1	Q9UPW5	1226 aa		27.64	■■■□□ 2.02
CAPN1-222	ENST00000532285	SHMT1	P34896	483 aa		27.63	■■■□□ 2.01
CAPN1-222	ENST00000532285	SH3D19	Q5HYK7	790 aa		27.63	■■■□□ 2.01
CAPN1-222	ENST00000532285	AMOTL1	Q8IY63	956 aa		27.63	■■■□□ 2.01
CAPN1-222	ENST00000532285	STRBP	Q96SI9	672 aa	Known RBP	27.63	■■■□□ 2.01
CAPN1-222	ENST00000532285	EFCC1	Q9HA90	598 aa		27.63	■■■□□ 2.01
CAPN1-222	ENST00000532285	ADGRA2	Q96PE1	1338 aa		27.63	■■■□□ 2.01
CAPN1-222	ENST00000532285	GH2	P01242	217 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	PDE1A	P54750	535 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	HMGCS2	P54868	508 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	KIF22	Q14807	665 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	OSBP2	Q969R2	916 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	LNPK	Q9C0E8	428 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	CPA4	Q9UI42	421 aa		27.62	■■■□□ 2.01
CAPN1-222	ENST00000532285	CYP2C8	P10632	490 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	BACE1	P56817	501 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	ABCB5	Q2M3G0	1257 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	B4GALNT3	Q6L9W6	998 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	FSD1	Q9BTV5	496 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	CABP5	Q9NP86	173 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	HPS5	Q9UPZ3	1129 aa		27.61	■■■□□ 2.01
CAPN1-222	ENST00000532285	C19orf81	C9J6K1	198 aa		27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	USP17L10	C9JJH3	530 aa		27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	CYP2D6	P10635	497 aa		27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	LACTB	P83111	547 aa	Predicted RBP	27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	MTMR2	Q13614	643 aa		27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	TREML2	Q5T2D2	321 aa		27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	SWAP70	Q9UH65	585 aa		27.6	■■■□□ 2.01
CAPN1-222	ENST00000532285	USP17L12	C9JPN9	530 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	USP17L21	D6R901	530 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	CAP1	Q01518	475 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	EVX2	Q03828	476 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	PABPC4	Q13310	644 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	C12orf60	Q5U649	245 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	TMOD4	Q9NZQ9	345 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	PNMA3	Q9UL41	463 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	ZSWIM8	A7E2V4	1837 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	MGAM	O43451	1857 aa		27.59	■■■□□ 2.01
CAPN1-222	ENST00000532285	NUCB1	Q02818	461 aa		27.58	■■■□□ 2.01
CAPN1-222	ENST00000532285	CHD1L	Q86WJ1	897 aa		27.58	■■■□□ 2.01
CAPN1-222	ENST00000532285	PTPN22	Q9Y2R2	807 aa		27.58	■■■□□ 2.01
CAPN1-222	ENST00000532285	GNAT2	P19087	354 aa		27.57	■■■□□ 2
CAPN1-222	ENST00000532285	IRX6	P78412	446 aa	Predicted RBP	27.57	■■■□□ 2
CAPN1-222	ENST00000532285	RAB3GAP1	Q15042	981 aa		27.57	■■■□□ 2
CAPN1-222	ENST00000532285	GIMAP6	Q6P9H5	292 aa		27.57	■■■□□ 2
CAPN1-222	ENST00000532285	SMCR8	Q8TEV9	937 aa	Predicted RBP	27.57	■■■□□ 2
CAPN1-222	ENST00000532285	EVI5L	Q96CN4	794 aa		27.57	■■■□□ 2
CAPN1-222	ENST00000532285	GSG1L2	A8MUP6	293 aa		27.56	■■■□□ 2
CAPN1-222	ENST00000532285	GPAA1	O43292	621 aa		27.56	■■■□□ 2
CAPN1-222	ENST00000532285	GNRH1	P01148	92 aa		27.56	■■■□□ 2
CAPN1-222	ENST00000532285	BCR	P11274	1271 aa		27.56	■■■□□ 2
CAPN1-222	ENST00000532285	CTR9	Q6PD62	1173 aa		27.56	■■■□□ 2
CAPN1-222	ENST00000532285	DYNLL2	Q96FJ2	89 aa		27.56	■■■□□ 2
CAPN1-222	ENST00000532285		M0R2C6	588 aa		27.55	■■■□□ 2
CAPN1-222	ENST00000532285	OSBP	P22059	807 aa		27.55	■■■□□ 2
CAPN1-222	ENST00000532285	ARHGAP39	Q9C0H5	1083 aa		27.55	■■■□□ 2
CAPN1-222	ENST00000532285	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.55	■■■□□ 2
CAPN1-222	ENST00000532285	CYP2D7	A0A087X1C5	515 aa		27.54	■■■□□ 2
CAPN1-222	ENST00000532285	ZMYM1	Q5SVZ6	1142 aa		27.54	■■■□□ 2
CAPN1-222	ENST00000532285	USP17L2	Q6R6M4	530 aa		27.54	■■■□□ 2
CAPN1-222	ENST00000532285	SLC44A5	Q8NCS7	719 aa		27.54	■■■□□ 2
CAPN1-222	ENST00000532285	HTT	P42858	3142 aa		27.54	■■■□□ 2
CAPN1-222	ENST00000532285	MPHOSPH10	O00566	681 aa	Known RBP	27.53	■■■□□ 2
CAPN1-222	ENST00000532285	CDK8	P49336	464 aa		27.53	■■■□□ 2
CAPN1-222	ENST00000532285	SBK1	Q52WX2	424 aa		27.53	■■■□□ 2
CAPN1-222	ENST00000532285	C16orf86	Q6ZW13	317 aa		27.53	■■■□□ 2
CAPN1-222	ENST00000532285	HOXA7	P31268	230 aa	Predicted RBP	27.52	■■■□□ 2
CAPN1-222	ENST00000532285	GUCY1A2	P33402	732 aa		27.52	■■■□□ 2
CAPN1-222	ENST00000532285	PSMC4	P43686	418 aa		27.52	■■■□□ 2
CAPN1-222	ENST00000532285	SEPT2	Q15019	361 aa		27.52	■■■□□ 2
CAPN1-222	ENST00000532285	TICAM2	Q86XR7	235 aa		27.52	■■■□□ 2
CAPN1-222	ENST00000532285	SEC62	Q99442	399 aa	Known RBP	27.52	■■■□□ 2
CAPN1-222	ENST00000532285	FEZ1	Q99689	392 aa		27.52	■■■□□ 2
CAPN1-222	ENST00000532285	ASCC2	Q9H1I8	757 aa	Predicted RBP	27.52	■■■□□ 2
CAPN1-222	ENST00000532285	EMILIN3	Q9NT22	766 aa		27.52	■■■□□ 2
CAPN1-222	ENST00000532285	PATL2	C9JE40	543 aa	Known RBP	27.51	■■□□□ 1.99
CAPN1-222	ENST00000532285	APP	P05067	770 aa		27.51	■■□□□ 1.99
CAPN1-222	ENST00000532285	GCLC	P48506	637 aa	Predicted RBP	27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms