RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
LRRK1-209ENST00000532145 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
LRRK1-209ENST00000532145 SLC4A4Q9Y6R1 1079 aa16.16■□□□□ 0.18
LRRK1-209ENST00000532145 ITGB4P16144 1822 aa16.16■□□□□ 0.18
LRRK1-209ENST00000532145 ZRANB2O95218 330 aaKnown RBP eCLIP16.16■□□□□ 0.18
LRRK1-209ENST00000532145 ERCC5P28715 1186 aaPredicted RBP16.16■□□□□ 0.18
LRRK1-209ENST00000532145 RRP12Q5JTH9 1297 aaKnown RBP16.16■□□□□ 0.18
LRRK1-209ENST00000532145 MNS1Q8NEH6 495 aa16.16■□□□□ 0.18
LRRK1-209ENST00000532145 RNF41Q9H4P4 317 aaPredicted RBP16.16■□□□□ 0.18
LRRK1-209ENST00000532145 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
LRRK1-209ENST00000532145 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 CT47A1Q5JQC4 288 aaPredicted RBP16.15■□□□□ 0.18
LRRK1-209ENST00000532145 ZNF654Q8IZM8 581 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 ARGLU1Q9NWB6 273 aaPredicted RBP16.15■□□□□ 0.18
LRRK1-209ENST00000532145 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 SLIT2O94813 1529 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 SNAP23O00161 211 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 TPM1P09493 284 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 NR1I3Q14994 352 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 ZNF827Q17R98 1081 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 PLCD1P51178 756 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 MAP3K9P80192 1104 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
LRRK1-209ENST00000532145 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 CARD6Q9BX69 1037 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 RNF26Q9BY78 433 aaPredicted RBP16.15■□□□□ 0.18
LRRK1-209ENST00000532145 CSRNP2Q9H175 543 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 TOMM22Q9NS69 142 aa16.15■□□□□ 0.18
LRRK1-209ENST00000532145 BCORQ6W2J9 1755 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 A0A1B0GTH6 734 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 PNMA6AP0CW24 399 aaPredicted RBP16.14■□□□□ 0.17
LRRK1-209ENST00000532145 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
LRRK1-209ENST00000532145 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 SAMSN1Q9NSI8 373 aaKnown RBP16.14■□□□□ 0.17
LRRK1-209ENST00000532145 ADKP55263 362 aaKnown RBP16.14■□□□□ 0.17
LRRK1-209ENST00000532145 TOGARAM2Q6ZUX3 1019 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 USP49Q70CQ1 688 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 PDILTQ8N807 584 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 WDR24Q96S15 920 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
LRRK1-209ENST00000532145 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
LRRK1-209ENST00000532145 PPARAQ07869 468 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 SEC23AQ15436 765 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 CASQ1P31415 396 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 BCAMP50895 628 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 GNG11P61952 73 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 TMCO3Q6UWJ1 677 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 APTXQ7Z2E3 356 aaKnown RBP16.13■□□□□ 0.17
LRRK1-209ENST00000532145 NUP133Q8WUM0 1156 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 UBAC1Q9BSL1 405 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
LRRK1-209ENST00000532145 DISP2A7MBM2 1401 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 SUSD4Q5VX71 490 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 KIFC2Q96AC6 838 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 SHISA4Q96DD7 197 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 ST7Q9NRC1 585 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 MRFAP1Q9Y605 127 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 NHSL1Q5SYE7 1610 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 CCDC34Q96HJ3 373 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 PANX2Q96RD6 677 aa16.12■□□□□ 0.17
LRRK1-209ENST00000532145 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 ATP8B1O43520 1251 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 MIGA1Q8NAN2 632 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 XBP1P17861 261 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 PLA2G4AP47712 749 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 PKN1Q16512 942 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 TAF3Q5VWG9 929 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 FAM177A1Q8N128 213 aaPredicted RBP16.11■□□□□ 0.17
LRRK1-209ENST00000532145 ESR2Q92731 530 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 PHF20Q9BVI0 1012 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 TNKSO95271 1327 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
LRRK1-209ENST00000532145 A0A087X0B3 334 aa16.1■□□□□ 0.17
LRRK1-209ENST00000532145 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
LRRK1-209ENST00000532145 FUT2Q10981 343 aa16.1■□□□□ 0.17
LRRK1-209ENST00000532145 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
LRRK1-209ENST00000532145 GPR161Q8N6U8 529 aaKnown RBP16.1■□□□□ 0.17
LRRK1-209ENST00000532145 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
LRRK1-209ENST00000532145 CUL4BQ13620 913 aa16.1■□□□□ 0.17
LRRK1-209ENST00000532145 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
LRRK1-209ENST00000532145 AKR1B15C9JRZ8 316 aaPredicted RBP16.09■□□□□ 0.17
LRRK1-209ENST00000532145 BMP15O95972 392 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 PBX1P40424 430 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 ADGRA1Q86SQ6 560 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 FERMT2Q96AC1 680 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 DHX58Q96C10 678 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
LRRK1-209ENST00000532145 KRT2P35908 639 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
LRRK1-209ENST00000532145 PPP2R3AQ06190 1150 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
LRRK1-209ENST00000532145 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms