RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 MAPK1P28482 360 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 RASGRF1Q13972 1273 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 GRIK5Q16478 980 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 CCDC158Q5M9N0 1113 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 CST9Q5W186 159 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 SIRT2Q8IXJ6 389 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZGPATQ8N5A5 531 aaKnown RBP7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZNF592Q92610 1267 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 HLA-CQ95604 372 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 ARMC5Q96C12 935 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 PRMT6Q96LA8 375 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 SUGT1Q9Y2Z0 365 aa7.06□□□□□ -1.28
HMGB1P42-201ENST00000532126 CLRN2A0PK11 232 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 RAB11FIP3O75154 756 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 LDHBP07195 334 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 SLC10A3P09131 477 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 UQCRFS1P1P0C7P4 283 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 RASA1P20936 1047 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 CRKP46108 304 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 FGD1P98174 961 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 HDLBPQ00341 1268 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 NR1H3Q13133 447 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 TTC39AQ5SRH9 613 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 DLK2Q6UY11 383 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 AACSQ86V21 672 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 APOBEC3FQ8IUX4 373 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 GLYCTKQ8IVS8 523 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 CLASRPQ8N2M8 674 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 DNAJC5GQ8N7S2 189 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 SPATA5Q8NB90 893 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 RHPN1Q8TCX5 695 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 TEKT1Q969V4 418 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 EAF2Q96CJ1 260 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 KIF1BPQ96EK5 621 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 CDCA5Q96FF9 252 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZBED3Q96IU2 234 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 CRBNQ96SW2 442 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 DBNDD2Q9BQY9 259 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 MRIQ9BWK5 157 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 ABCF2Q9UG63 623 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 MKRN1Q9UHC7 482 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 DCTN4Q9UJW0 460 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 SCAF8Q9UPN6 1271 aaKnown RBP7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 PCDHAC2Q9Y5I4 1007 aa7.05□□□□□ -1.28
HMGB1P42-201ENST00000532126 COL1A1P02452 1464 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 PDS5AQ29RF7 1337 aaKnown RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 SALL1Q9NSC2 1324 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 PSME4Q14997 1843 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 TLDC2A0PJX2 215 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 CFAP99D6REC4 459 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 PRDX5P30044 214 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 NF2P35240 595 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 SLC4A3P48751 1232 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 PTK7Q13308 1070 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 DEFB115Q30KQ5 88 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 SPTY2D1Q68D10 685 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 C2orf69Q8N8R5 385 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 KLRG1Q96E93 195 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZDHHC15Q96MV8 337 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 KCNK17Q96T54 332 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 BACH2Q9BYV9 841 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 CCDC8Q9H0W5 538 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 DEFB129Q9H1M3 183 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 TDRD3Q9H7E2 651 aaKnown RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 VEZTQ9HBM0 779 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 METTL14Q9HCE5 456 aaKnown RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 IL1RAPL2Q9NP60 686 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 HMG20BQ9P0W2 317 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 DBNLQ9UJU6 430 aaKnown RBP7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
HMGB1P42-201ENST00000532126 RASSF10A6NK89 507 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 H3BRB1 525 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 ABL1P00519 1130 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 IFIT2P09913 472 aaKnown RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 ATP2B1P20020 1258 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 MCAMP43121 646 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 GNL2Q13823 731 aaKnown RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 TNFAIP1Q13829 316 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 PRAMEF18Q5VWM3 479 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 HHIPL2Q6UWX4 724 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 PI16Q6UXB8 463 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 SAPCD2Q86UD0 394 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 DZIP1Q86YF9 867 aaKnown RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 SLC43A3Q8NBI5 491 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 EPS8L1Q8TE68 723 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZNF512BQ96KM6 892 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 LNPKQ9C0E8 428 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 GBA2Q9HCG7 927 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 TMOD2Q9NZR1 351 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 RAI14Q9P0K7 980 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 ZNF70Q9UC06 446 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 BRPF3Q9ULD4 1205 aa7.03□□□□□ -1.28
HMGB1P42-201ENST00000532126 SUPT16HQ9Y5B9 1047 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms