RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 GDAP1L1Q96MZ0 367 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 ZBTB1Q9Y2K1 713 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 PHLPP2Q6ZVD8 1323 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 CAPN2P17655 700 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 STAT6P42226 847 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 RBL2Q08999 1139 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 NCAPHQ15003 741 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
NXF1-211ENST00000531709 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
NXF1-211ENST00000531709 PARD6BQ9BYG5 372 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 TNKSO95271 1327 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
NXF1-211ENST00000531709 GNAT2P19087 354 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
NXF1-211ENST00000531709 KRT9P35527 623 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
NXF1-211ENST00000531709 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
NXF1-211ENST00000531709 ZBTB22O15209 634 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 FMR1Q06787 632 aaKnown RBP eCLIP12.85□□□□□ -0.35
NXF1-211ENST00000531709 CNGA4Q8IV77 575 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 TANGO6Q9C0B7 1094 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
NXF1-211ENST00000531709 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
NXF1-211ENST00000531709 CYP2D7A0A087X1C5 515 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 TEX33O43247 280 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 IFNAR1P17181 557 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 PPARAQ07869 468 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.84□□□□□ -0.35
NXF1-211ENST00000531709 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 TMEM94Q12767 1356 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 MAP3K15Q6ZN16 1313 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 SLFN14P0C7P3 912 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 RUFY1Q96T51 708 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 XRN1Q8IZH2 1706 aaKnown RBP12.84□□□□□ -0.35
NXF1-211ENST00000531709 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 TTC38Q5R3I4 469 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
NXF1-211ENST00000531709 ERCC3P19447 782 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 MTIF2P46199 727 aaKnown RBP12.83□□□□□ -0.36
NXF1-211ENST00000531709 GYG1P46976 350 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
NXF1-211ENST00000531709 PIGBQ92521 554 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 CRACR2AQ9BSW2 395 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 ISCA1Q9BUE6 129 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
NXF1-211ENST00000531709 USP5P45974 858 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 PLCD1P51178 756 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 PTGDRQ13258 359 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.36
NXF1-211ENST00000531709 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 ACRBPQ8NEB7 543 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
NXF1-211ENST00000531709 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
NXF1-211ENST00000531709 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
NXF1-211ENST00000531709 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 SSBP05455 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
NXF1-211ENST00000531709 PTPREP23469 700 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
NXF1-211ENST00000531709 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
NXF1-211ENST00000531709 IGDCC4Q8TDY8 1250 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 TUBE1Q9UJT0 475 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 CCDC181Q5TID7 509 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 LIFRP42702 1097 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
NXF1-211ENST00000531709 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
NXF1-211ENST00000531709 KAT14Q9H8E8 782 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
NXF1-211ENST00000531709 SLIT1O75093 1534 aa12.82□□□□□ -0.36
NXF1-211ENST00000531709 LONRF2Q1L5Z9 754 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 CCDC122Q5T0U0 273 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
NXF1-211ENST00000531709 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 MEGF6O75095 1541 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 USP17L21D6R901 530 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 ADAMTS2O95450 1211 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 BMP15O95972 392 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 HDXQ7Z353 690 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms