RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 CSADQ9Y600 493 aa8.71□□□□□ -1.02
CASP4-210ENST00000531546 LRIG2O94898 1065 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 ZSCAN22P10073 491 aaPredicted RBP8.7□□□□□ -1.02
CASP4-210ENST00000531546 ZBTB37Q5TC79 503 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 PI16Q6UXB8 463 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 LCNL1Q6ZST4 164 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 ARMCX6Q7L4S7 300 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 NPAS4Q8IUM7 802 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 FBXO15Q8NCQ5 510 aaPredicted RBP8.7□□□□□ -1.02
CASP4-210ENST00000531546 NECAB3Q96P71 396 aaPredicted RBP8.7□□□□□ -1.02
CASP4-210ENST00000531546 SOGA1O94964 1423 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
CASP4-210ENST00000531546 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
CASP4-210ENST00000531546 DIP2BQ9P265 1576 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 DCDC2CA8MYV0 355 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 FAM155AB1AL88 458 aaPredicted RBP8.69□□□□□ -1.02
CASP4-210ENST00000531546 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
CASP4-210ENST00000531546 GDNFP39905 211 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 RING1Q06587 406 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 SCARA3Q6AZY7 606 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 LILRA6Q6PI73 481 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 CEP44Q9C0F1 390 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 C1orf115Q9H7X2 142 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 GRIN2BQ13224 1484 aa8.69□□□□□ -1.02
CASP4-210ENST00000531546 UBE3DQ7Z6J8 389 aa8.68□□□□□ -1.02
CASP4-210ENST00000531546 MFSD4AQ8N468 514 aa8.68□□□□□ -1.02
CASP4-210ENST00000531546 RAPGEFL1Q9UHV5 662 aa8.68□□□□□ -1.02
CASP4-210ENST00000531546 LRRC14Q15048 493 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 CEP170Q5SW79 1584 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 LLGL2Q6P1M3 1020 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 NXPE4Q6UWF7 544 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 PBRM1Q86U86 1689 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 TXNDC2Q86VQ3 553 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 C12orf40Q86WS4 652 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 ZNF507Q8TCN5 953 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 ELMO3Q96BJ8 720 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 HSPA12BQ96MM6 686 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 SEMA3GQ9NS98 782 aa8.67□□□□□ -1.02
CASP4-210ENST00000531546 TPX2Q9ULW0 747 aaKnown RBP8.67□□□□□ -1.02
CASP4-210ENST00000531546 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 GSTT1P30711 240 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 NSUN3Q9H649 340 aaKnown RBP8.66□□□□□ -1.02
CASP4-210ENST00000531546 ATP13A1Q9HD20 1204 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 PPM1HQ9ULR3 514 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
CASP4-210ENST00000531546 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.02
CASP4-210ENST00000531546 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 TPTE2Q6XPS3 522 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 C14orf37Q86TY3 774 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 C3orf58Q8NDZ4 430 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 CCER1Q8TC90 406 aaPredicted RBP8.65□□□□□ -1.02
CASP4-210ENST00000531546 DIRC2Q96SL1 478 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 SRCIN1Q9C0H9 1055 aa8.65□□□□□ -1.02
CASP4-210ENST00000531546 WDR97A6NE52 1622 aa8.65□□□□□ -1.03
CASP4-210ENST00000531546 NCANO14594 1321 aa8.64□□□□□ -1.03
CASP4-210ENST00000531546 ENC1O14682 589 aa8.64□□□□□ -1.03
CASP4-210ENST00000531546 BMP6P22004 513 aa8.64□□□□□ -1.03
CASP4-210ENST00000531546 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
CASP4-210ENST00000531546 CDKAL1Q5VV42 579 aa8.64□□□□□ -1.03
CASP4-210ENST00000531546 TMC7Q7Z402 723 aa8.64□□□□□ -1.03
CASP4-210ENST00000531546 GRIN3AQ8TCU5 1115 aa8.64□□□□□ -1.03
CASP4-210ENST00000531546 PNMA6FA0A0J9YX94 578 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 H3BS24 57 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 SLITRK5O94991 958 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 KRT1P04264 644 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 RAC2P15153 192 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 MFSD2AQ8NA29 543 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 ALPK1Q96QP1 1244 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 EPB41L4BQ9H329 900 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 SPATA31D1Q6ZQQ2 1576 aa8.63□□□□□ -1.03
CASP4-210ENST00000531546 PRR33A8MZF0 331 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 PRRG2O14669 202 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 TTLL10Q6ZVT0 673 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 MIPEPQ99797 713 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 CYP8B1Q9UNU6 501 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 CAPN6Q9Y6Q1 641 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 FGD5Q6ZNL6 1462 aa8.62□□□□□ -1.03
CASP4-210ENST00000531546 PRAMEF27A3QJZ7 478 aa8.61□□□□□ -1.03
CASP4-210ENST00000531546 B8ZZF3 427 aa8.61□□□□□ -1.03
CASP4-210ENST00000531546 PAGE1O75459 146 aa8.61□□□□□ -1.03
CASP4-210ENST00000531546 FGD1P98174 961 aa8.61□□□□□ -1.03
CASP4-210ENST00000531546 AMIGO3Q86WK7 504 aa8.61□□□□□ -1.03
CASP4-210ENST00000531546 COX4I2Q96KJ9 171 aa8.61□□□□□ -1.03
CASP4-210ENST00000531546 DCP1AQ9NPI6 582 aaPredicted RBP8.61□□□□□ -1.03
CASP4-210ENST00000531546 MAPKBP1O60336 1514 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 TCAF2A6NFQ2 919 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 CAP2P40123 477 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 ENOX2Q16206 610 aaKnown RBP8.6□□□□□ -1.03
CASP4-210ENST00000531546 KCNA10Q16322 511 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 ABHD4Q8TB40 342 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 CD320Q9NPF0 282 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
CASP4-210ENST00000531546 CCDC88BA6NC98 1476 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms