RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FMR1Q06787 632 aaKnown RBP eCLIP7.28□□□□□ -1.24
USP47-211ENST00000531513 INPP5AQ14642 412 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 C22orf34Q6ZV56 151 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 CYFIP1Q7L576 1253 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 MFSD4AQ8N468 514 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 ANKRD24Q8TF21 1146 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 KIRREL1Q96J84 757 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 MIPEPQ99797 713 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 TPX2Q9ULW0 747 aaKnown RBP7.28□□□□□ -1.24
USP47-211ENST00000531513 TSPAN15O95858 294 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 ZNF865P0CJ78 1059 aaPredicted RBP7.27□□□□□ -1.25
USP47-211ENST00000531513 RAP1GAPP47736 663 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 FGD1P98174 961 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 PTPN11Q06124 597 aaPredicted RBP7.27□□□□□ -1.25
USP47-211ENST00000531513 SLBPQ14493 270 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP47-211ENST00000531513 PRR23BQ6ZRT6 265 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 GAL3ST3Q96A11 431 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 PLPPR2Q96GM1 343 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 CYP8B1Q9UNU6 501 aa7.27□□□□□ -1.25
USP47-211ENST00000531513 H3BS24 57 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 NKG7Q16617 165 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 SFRP5Q5T4F7 317 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 MPZL3Q6UWV2 235 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 WWC3Q9ULE0 1092 aa7.26□□□□□ -1.25
USP47-211ENST00000531513 ALG1LQ6GMV1 187 aa7.25□□□□□ -1.25
USP47-211ENST00000531513 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.25□□□□□ -1.25
USP47-211ENST00000531513 TOX2Q96NM4 488 aa7.25□□□□□ -1.25
USP47-211ENST00000531513 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
USP47-211ENST00000531513 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
USP47-211ENST00000531513 ST14Q9Y5Y6 855 aa7.25□□□□□ -1.25
USP47-211ENST00000531513 CAPN6Q9Y6Q1 641 aa7.25□□□□□ -1.25
USP47-211ENST00000531513 RBAK-RBAKDNI3L0D1 243 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 GIPC1O14908 333 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 USP17L7P0C7H9 530 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 CFPP27918 469 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 GDNFP39905 211 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 CAP2P40123 477 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 CDK8P49336 464 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 TMEM67Q5HYA8 995 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 WIPI1Q5MNZ9 446 aaPredicted RBP7.24□□□□□ -1.25
USP47-211ENST00000531513 SYDE1Q6ZW31 735 aaPredicted RBP7.24□□□□□ -1.25
USP47-211ENST00000531513 HDXQ7Z353 690 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 C1QL4Q86Z23 238 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 NPAS4Q8IUM7 802 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 ASB16Q96NS5 453 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 C12orf49Q9H741 205 aa7.24□□□□□ -1.25
USP47-211ENST00000531513 ETF1P62495 437 aaKnown RBP7.23□□□□□ -1.25
USP47-211ENST00000531513 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
USP47-211ENST00000531513 LETMD1Q6P1Q0 360 aa7.23□□□□□ -1.25
USP47-211ENST00000531513 LRRC56Q8IYG6 542 aaPredicted RBP7.23□□□□□ -1.25
USP47-211ENST00000531513 MFSD2AQ8NA29 543 aa7.23□□□□□ -1.25
USP47-211ENST00000531513 RIN3Q8TB24 985 aa7.23□□□□□ -1.25
USP47-211ENST00000531513 FAM8A1Q9UBU6 413 aa7.23□□□□□ -1.25
USP47-211ENST00000531513 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
USP47-211ENST00000531513 CBX7O95931 251 aa7.22□□□□□ -1.25
USP47-211ENST00000531513 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
USP47-211ENST00000531513 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
USP47-211ENST00000531513 LCNL1Q6ZST4 164 aa7.22□□□□□ -1.25
USP47-211ENST00000531513 THAP5Q7Z6K1 395 aa7.22□□□□□ -1.25
USP47-211ENST00000531513 ZSCAN29Q8IWY8 852 aaPredicted RBP7.22□□□□□ -1.25
USP47-211ENST00000531513 KRT1P04264 644 aa7.21□□□□□ -1.26
USP47-211ENST00000531513 ZNF746Q6NUN9 644 aaPredicted RBP7.21□□□□□ -1.26
USP47-211ENST00000531513 SV2BQ7L1I2 683 aa7.21□□□□□ -1.26
USP47-211ENST00000531513 HID1Q8IV36 788 aa7.21□□□□□ -1.26
USP47-211ENST00000531513 XAGE3Q8WTP9 111 aa7.21□□□□□ -1.26
USP47-211ENST00000531513 DIRC2Q96SL1 478 aa7.21□□□□□ -1.26
USP47-211ENST00000531513 NSUN3Q9H649 340 aaKnown RBP7.21□□□□□ -1.26
USP47-211ENST00000531513 SLAMF8Q9P0V8 285 aa7.21□□□□□ -1.26
USP47-211ENST00000531513 TTF2Q9UNY4 1162 aaKnown RBP7.21□□□□□ -1.26
USP47-211ENST00000531513 CST3P01034 146 aaPredicted RBP7.2□□□□□ -1.26
USP47-211ENST00000531513 C1QTNF9P0C862 333 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 GRK4P32298 578 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 TTBK2Q6IQ55 1244 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 ANKLE2Q86XL3 938 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 ZSCAN18Q8TBC5 510 aaPredicted RBP7.2□□□□□ -1.26
USP47-211ENST00000531513 UBE2FQ969M7 185 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 ALPK1Q96QP1 1244 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 SNCAIPQ9Y6H5 919 aa7.2□□□□□ -1.26
USP47-211ENST00000531513 FBXO15Q8NCQ5 510 aaPredicted RBP7.19□□□□□ -1.26
USP47-211ENST00000531513 ZSWIM5Q9P217 1185 aa7.19□□□□□ -1.26
USP47-211ENST00000531513 P4HBP07237 508 aaKnown RBP7.18□□□□□ -1.26
USP47-211ENST00000531513 TNK2Q07912 1038 aa7.18□□□□□ -1.26
USP47-211ENST00000531513 SEPT6Q14141 434 aa7.18□□□□□ -1.26
USP47-211ENST00000531513 CCDC120Q96HB5 630 aa7.18□□□□□ -1.26
USP47-211ENST00000531513 DPH2Q9BQC3 489 aaPredicted RBP7.18□□□□□ -1.26
USP47-211ENST00000531513 KCNK12Q9HB15 430 aa7.18□□□□□ -1.26
USP47-211ENST00000531513 DNAJC25-GNG10A0A024R161 153 aa7.17□□□□□ -1.26
USP47-211ENST00000531513 NFIBO00712 420 aa7.17□□□□□ -1.26
USP47-211ENST00000531513 ZSCAN22P10073 491 aaPredicted RBP7.17□□□□□ -1.26
USP47-211ENST00000531513 KIR3DL1P43629 444 aa7.17□□□□□ -1.26
USP47-211ENST00000531513 TTC6Q86TZ1 520 aa7.17□□□□□ -1.26
USP47-211ENST00000531513 CDH24Q86UP0 819 aa7.17□□□□□ -1.26
USP47-211ENST00000531513 COX4I2Q96KJ9 171 aa7.17□□□□□ -1.26
USP47-211ENST00000531513 RBM47A0AV96 593 aaKnown RBP7.16□□□□□ -1.26
USP47-211ENST00000531513 ESR1P03372 595 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 RAC2P15153 192 aa7.16□□□□□ -1.26
USP47-211ENST00000531513 CYP7A1P22680 504 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms