RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RLBP1P12271 317 aa22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 BACE1P56817 501 aa22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 TRIM32Q13049 653 aa22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 GJD2Q9UKL4 321 aa22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 NR2E3Q9Y5X4 410 aa22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 IRX3P78415 501 aaPredicted RBP22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 ITPRIPQ8IWB1 547 aa22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 FTSJ3Q8IY81 847 aaKnown RBP22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 ZNF512BQ96KM6 892 aaPredicted RBP22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 TRIM34Q9BYJ4 488 aa22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 CRISPLD2Q9H0B8 497 aa22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 TMOD4Q9NZQ9 345 aa22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 NAV1Q8NEY1 1877 aa22.55■■□□□ 1.2
SSSCA1-206ENST00000531405 HMGCRP04035 888 aa22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 FOXP4Q8IVH2 680 aaPredicted RBP22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 DIS3LQ8TF46 1054 aaKnown RBP22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 PAWRQ96IZ0 340 aaKnown RBP22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 P2RX7Q99572 595 aaKnown RBP22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 PRO3102Q9H379 93 aa22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 MORF4L1Q9UBU8 362 aa22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 ZBTB21Q9ULJ3 1066 aa22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 NDUFB9Q9Y6M9 179 aa22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 DNAH12Q6ZR08 3092 aa22.54■■□□□ 1.2
SSSCA1-206ENST00000531405 FRMPD3Q5JV73 1810 aa22.53■■□□□ 1.2
SSSCA1-206ENST00000531405 EVI5O60447 810 aa22.53■■□□□ 1.2
SSSCA1-206ENST00000531405 CYP7A1P22680 504 aa22.53■■□□□ 1.2
SSSCA1-206ENST00000531405 MIGA1Q8NAN2 632 aa22.53■■□□□ 1.2
SSSCA1-206ENST00000531405 TXNRD2Q9NNW7 524 aa22.53■■□□□ 1.2
SSSCA1-206ENST00000531405 IDH1O75874 414 aaKnown RBP22.52■■□□□ 1.2
SSSCA1-206ENST00000531405 HOXA7P31268 230 aaPredicted RBP22.52■■□□□ 1.2
SSSCA1-206ENST00000531405 HERVK_113P62684 666 aa22.52■■□□□ 1.2
SSSCA1-206ENST00000531405 MYH8P13535 1937 aa22.51■■□□□ 1.19
SSSCA1-206ENST00000531405 USP17L10C9JJH3 530 aa22.51■■□□□ 1.19
SSSCA1-206ENST00000531405 HLA-DOAP06340 250 aa22.51■■□□□ 1.19
SSSCA1-206ENST00000531405 CYP2B6P20813 491 aa22.51■■□□□ 1.19
SSSCA1-206ENST00000531405 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
SSSCA1-206ENST00000531405 TRIB2Q92519 343 aa22.51■■□□□ 1.19
SSSCA1-206ENST00000531405 C19orf81C9J6K1 198 aa22.5■■□□□ 1.19
SSSCA1-206ENST00000531405 MAGEB6Q8N7X4 407 aa22.5■■□□□ 1.19
SSSCA1-206ENST00000531405 ANTXR1Q9H6X2 564 aa22.5■■□□□ 1.19
SSSCA1-206ENST00000531405 HMX1Q9NP08 348 aaPredicted RBP22.5■■□□□ 1.19
SSSCA1-206ENST00000531405 RPTORQ8N122 1335 aa22.5■■□□□ 1.19
SSSCA1-206ENST00000531405 GH2P01242 217 aa22.49■■□□□ 1.19
SSSCA1-206ENST00000531405 CAPN2P17655 700 aa22.49■■□□□ 1.19
SSSCA1-206ENST00000531405 NECAB2Q7Z6G3 386 aa22.49■■□□□ 1.19
SSSCA1-206ENST00000531405 GPRC5AQ8NFJ5 357 aa22.49■■□□□ 1.19
SSSCA1-206ENST00000531405 EMILIN3Q9NT22 766 aa22.49■■□□□ 1.19
SSSCA1-206ENST00000531405 RBPJLQ9UBG7 517 aa22.49■■□□□ 1.19
SSSCA1-206ENST00000531405 COL6A3P12111 3177 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 USP5P45974 858 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 ZYXQ15942 572 aaKnown RBP22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 Q3C1V9 767 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 CEP85Q6P2H3 762 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 POTEEQ6S8J3 1075 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 GINM1Q9NU53 330 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 EXOC6BQ9Y2D4 811 aa22.48■■□□□ 1.19
SSSCA1-206ENST00000531405 PORCNQ9H237 461 aa22.47■■□□□ 1.19
SSSCA1-206ENST00000531405 STAP2Q9UGK3 403 aa22.47■■□□□ 1.19
SSSCA1-206ENST00000531405 IGSF3O75054 1194 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 PRKAR2AP13861 404 aaKnown RBP22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 MNX1P50219 401 aaPredicted RBP22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 ERVK-9P63128 1117 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 ERVK-24P63145 666 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 USP17L2Q6R6M4 530 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 AACSQ86V21 672 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 C7orf61Q8IZ16 206 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 ANKLE1Q8NAG6 615 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 NUDT12Q9BQG2 462 aa22.46■■□□□ 1.19
SSSCA1-206ENST00000531405 BAZ2AQ9UIF9 1905 aaKnown RBP22.45■■□□□ 1.18
SSSCA1-206ENST00000531405 TATDN1Q6P1N9 297 aa22.45■■□□□ 1.18
SSSCA1-206ENST00000531405 SOCS4Q8WXH5 440 aa22.45■■□□□ 1.18
SSSCA1-206ENST00000531405 FEZ1Q99689 392 aa22.45■■□□□ 1.18
SSSCA1-206ENST00000531405 MAPK4P31152 587 aa22.44■■□□□ 1.18
SSSCA1-206ENST00000531405 PDE3AQ14432 1141 aa22.44■■□□□ 1.18
SSSCA1-206ENST00000531405 MAP3K21Q5TCX8 1036 aa22.44■■□□□ 1.18
SSSCA1-206ENST00000531405 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
SSSCA1-206ENST00000531405 SERPINB13Q9UIV8 391 aa22.44■■□□□ 1.18
SSSCA1-206ENST00000531405 MYH7P12883 1935 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 XRCC5P13010 732 aaKnown RBP22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 MAP3K12Q12852 859 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 RAB3GAP1Q15042 981 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 CCL14Q16627 93 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 GPR142Q7Z601 462 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 CCAR1Q8IX12 1150 aaKnown RBP22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 USP6NLQ92738 828 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 NBPF3Q9H094 633 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 EHD4Q9H223 541 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 IL1RAPL2Q9NP60 686 aa22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 ZMYND8Q9ULU4 1186 aaPredicted RBP22.43■■□□□ 1.18
SSSCA1-206ENST00000531405 SOX1O00570 391 aaPredicted RBP22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 ZKSCAN1P17029 563 aaPredicted RBP22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 CACNB2Q08289 660 aaPredicted RBP22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 CERKLQ49MI3 558 aaPredicted RBP22.42■■□□□ 1.18
SSSCA1-206ENST00000531405 CERS3Q8IU89 383 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms